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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180122396
OASU01000088
117741
Bacteroidota
TAG
Leu
>WENV180122363
OASU01000059
398829
Bacteroidota
CCT
Arg
>WENV180122502
OASU01000372
398829
Bacteroidota
CCT
Arg
>WENV180122237
OASU01000003
175838
Bacteroidota
GTT
Asn
>WENV180122238
OASU01000003
175838
Bacteroidota
GTT
Asn
>WENV180122339
OASU01000047
280557
Bacteroidota
CAT
Met
>WENV180122564
OASU01002367
20492
Bacteroidota
GGA
Ser
>WENV180122298
OASU01000028
20206
Bacteroidota
GGA
Ser
>WENV180122670
OASU01019227
398871
Bacteroidota
TTC
Glu
>WENV180122397
OASU01000092
175903
Bacteroidota
GTG
His
>WENV180122624
OASU01007238
118089
Bacteroidota
TAG
Leu
>WENV180122233
OASU01000003
398872
Bacteroidota
GGT
Thr
>WENV180122230
OASU01000003
56072
Bacteroidota
TAA
Leu
>WENV180122247
OASU01000006
57807
Bacteroidota
TGA
Ser
>WENV180122264
OASU01000014
57807
Bacteroidota
TGA
Ser
>WENV180122379
OASU01000072
175902
Bacteroidota
GGC
Ala
>WENV180122572
OASU01002582
398860
Bacteroidota
CTC
Glu
>WENV180122503
OASU01000389
280451
Bacteroidota
CGT
Thr
>WENV180122232
OASU01000003
99847
Bacteroidota
GTA
Tyr
>WENV180122239
OASU01000004
99847
Bacteroidota
GTA
Tyr
>WENV180122585
OASU01003086
175844
Bacteroidota
GGC
Ala
>WENV180122296
OASU01000028
158068
Bacteroidota
GGG
Pro
>WENV180122277
OASU01000020
398828
Bacteroidota
CCG
Arg
>WENV180122644
OASU01011338
480325
Bacteroidota
CTG
Gln
>WENV180122645
OASU01011338
480325
Bacteroidota
CTG
Gln
>WENV180122312
OASU01000031
140771
Bacteroidota
>WENV180122309
OASU01000031
140771
Bacteroidota
>WENV180122364
OASU01000063
280446
Bacteroidota
TTT
Lys
>WENV180122299
OASU01000029
280446
Bacteroidota
TTT
Lys
>WENV180122320
OASU01000033
484496
Bacteroidota
TTG
Gln
>WENV180122410
OASU01000108
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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