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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180123178
OASW01000001
172207
Bacteroidota
GGG
Pro
>WENV180123204
OASW01000014
285360
Bacteroidota
TTT
Lys
>WENV180123272
OASW01000060
398829
Bacteroidota
CCT
Arg
>WENV180123214
OASW01000019
73057
Bacteroidota
GAG
Leu
>WENV180123296
OASW01000096
280557
Bacteroidota
CAT
Met
>WENV180123200
OASW01000012
56493
Bacteroidota
TGA
Ser
>WENV180123211
OASW01000017
351598
Bacteroidota
CGG
Pro
>WENV180123354
OASW01000323
169545
Bacteroidota
TGG
Pro
>WENV180123264
OASW01000058
175936
Bacteroidota
CAT
Met
>WENV180123206
OASW01000014
398860
Bacteroidota
CTC
Glu
>WENV180123235
OASW01000031
398860
Bacteroidota
CTC
Glu
>WENV180123184
OASW01000003
480404
Bacteroidota
TTG
Gln
>WENV180123341
OASW01000236
480404
Bacteroidota
TTG
Gln
>WENV180123191
OASW01000006
99847
Bacteroidota
GTA
Tyr
>WENV180123230
OASW01000025
399026
Bacteroidota
CCT
Arg
>WENV180123208
OASW01000016
27524
Bacteroidota
GGA
Ser
>WENV180123201
OASW01000012
27524
Bacteroidota
GGA
Ser
>WENV180123279
OASW01000074
280532
Bacteroidota
>WENV180123183
OASW01000002
229246
Bacteroidota
GGC
Ala
>WENV180123177
OASW01000001
480318
Bacteroidota
CTG
Gln
>WENV180123238
OASW01000034
159415
Bacteroidota
TAC
Val
>WENV180123237
OASW01000034
159415
Bacteroidota
TAC
Val
>WENV180123194
OASW01000007
176192
Bacteroidota
TCT
Arg
>WENV180123239
OASW01000040
176192
Bacteroidota
TCT
Arg
>WENV180123197
OASW01000011
69204
Bacteroidota
TGA
Ser
>WENV180123199
OASW01000012
69204
Bacteroidota
TGA
Ser
>WENV180123242
OASW01000041
69204
Bacteroidota
TGA
Ser
>WENV180123187
OASW01000004
117804
Bacteroidota
TAG
Leu
>WENV180123352
OASW01000321
365112
Bacteroidota
TTT
Lys
>WENV180123202
OASW01000013
365112
Bacteroidota
TTT
Lys
>WENV180123179
OASW01000001
365112
Bacteroidota
TTT
Lys
>WENV180123224
OASW01000023
398836
Bacteroidota
GCA
Cys
>WENV180123198
OASW01000011
398836
Bacteroidota
GCA
Cys
>WENV180123189
OASW01000005
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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