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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
91 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180123678
OASX01000114
295385
Bacteroidota
CCA
Trp
>WENV180123624
OASX01000072
285360
Bacteroidota
TTT
Lys
>WENV180123750
OASX01000195
285360
Bacteroidota
TTT
Lys
>WENV180123968
OASX01000837
285360
Bacteroidota
TTT
Lys
>WENV180123948
OASX01000677
117741
Bacteroidota
TAG
Leu
>WENV180123555
OASX01000025
398829
Bacteroidota
CCT
Arg
>WENV180123826
OASX01000304
398829
Bacteroidota
CCT
Arg
>WENV180123970
OASX01000840
175838
Bacteroidota
GTT
Asn
>WENV180123971
OASX01000840
175838
Bacteroidota
GTT
Asn
>WENV180124552
OASX01025894
175838
Bacteroidota
GTT
Asn
>WENV180123644
OASX01000085
404226
Bacteroidota
CCT
Arg
>WENV180123755
OASX01000205
404226
Bacteroidota
CCT
Arg
>WENV180123667
OASX01000102
175904
Bacteroidota
CGG
Pro
>WENV180123810
OASX01000256
280553
Bacteroidota
TTT
Lys
>WENV180123646
OASX01000086
280553
Bacteroidota
TTT
Lys
>WENV180124089
OASX01001860
280557
Bacteroidota
CAT
Met
>WENV180124085
OASX01001807
20492
Bacteroidota
GGA
Ser
>WENV180123511
OASX01000003
20492
Bacteroidota
GGA
Ser
>WENV180123883
OASX01000445
20206
Bacteroidota
GGA
Ser
>WENV180123757
OASX01000205
398871
Bacteroidota
TTC
Glu
>WENV180123756
OASX01000205
398871
Bacteroidota
TTC
Glu
>WENV180123743
OASX01000186
201819
Bacteroidota
CAT
Met
>WENV180123710
OASX01000146
56493
Bacteroidota
TGA
Ser
>WENV180124654
OASX01062649
56493
Bacteroidota
TGA
Ser
>WENV180123872
OASX01000405
175906
Bacteroidota
GTG
His
>WENV180123871
OASX01000405
175906
Bacteroidota
GTG
His
>WENV180123941
OASX01000645
175903
Bacteroidota
GTG
His
>WENV180123670
OASX01000104
118089
Bacteroidota
TAG
Leu
>WENV180123687
OASX01000125
398872
Bacteroidota
GGT
Thr
>WENV180123701
OASX01000135
398872
Bacteroidota
GGT
Thr
>WENV180123668
OASX01000102
280530
Bacteroidota
CCA
Trp
>WENV180123658
OASX01000096
203954
Bacteroidota
GTC
Asp
>WENV180123659
OASX01000096
203954
Bacteroidota
GTC
Asp
>WENV180123598
OASX01000044
178907
Bacteroidota
TCT
Arg
>WENV180123933
OASX01000625
20449
Bacteroidota
GGA
Ser
>WENV180124039
OASX01001363
20449
Bacteroidota
GGA
Ser
>WENV180123554
OASX01000025
56072
Bacteroidota
TAA
Leu
>WENV180123547
OASX01000022
57807
Bacteroidota
TGA
Ser
>WENV180123548
OASX01000022
57807
Bacteroidota
TGA
Ser
>WENV180123740
OASX01000183
57807
Bacteroidota
TGA
Ser
>WENV180123848
OASX01000344
57807
Bacteroidota
TGA
Ser
>WENV180123869
OASX01000404
57807
Bacteroidota
TGA
Ser
>WENV180123887
OASX01000467
57807
Bacteroidota
TGA
Ser
>WENV180124013
OASX01001105
57807
Bacteroidota
TGA
Ser
>WENV180123643
OASX01000084
175902
Bacteroidota
GGC
Ala
>WENV180124038
OASX01001360
398860
Bacteroidota
CTC
Glu
>WENV180123655
OASX01000089
480404
Bacteroidota
TTG
Gln
>WENV180123885
OASX01000455
480404
Bacteroidota
TTG
Gln
>WENV180124557
OASX01027787
280451
Bacteroidota
CGT
Thr
>WENV180123522
OASX01000009
99847
Bacteroidota
GTA
Tyr
>WENV180123610
OASX01000054
99847
Bacteroidota
GTA
Tyr
>WENV180123949
OASX01000679
99847
Bacteroidota
GTA
Tyr
>WENV180123973
OASX01000840
99847
Bacteroidota
GTA
Tyr
>WENV180123862
OASX01000397
399200
Bacteroidota
CAT
Met
>WENV180123957
OASX01000715
399200
Bacteroidota
CAT
Met
>WENV180123908
OASX01000513
215303
Bacteroidota
GTC
Asp
>WENV180123546
OASX01000021
332896
Bacteroidota
TTT
Lys
>WENV180123597
OASX01000043
332896
Bacteroidota
TTT
Lys
>WENV180123925
OASX01000565
332896
Bacteroidota
TTT
Lys
>WENV180124273
OASX01005068
488746
Bacteroidota
CTG
Gln
>WENV180123630
OASX01000075
280478
Bacteroidota
GCC
Gly
>WENV180124665
OASX01062874
280478
Bacteroidota
GCC
Gly
>WENV180123870
OASX01000404
20766
Bacteroidota
GGA
Ser
>WENV180123719
OASX01000150
175844
Bacteroidota
GGC
Ala
>WENV180123671
OASX01000104
73011
Bacteroidota
CAA
Leu
>WENV180123524
OASX01000010
158068
Bacteroidota
GGG
Pro
>WENV180123923
OASX01000551
158068
Bacteroidota
GGG
Pro
>WENV180124024
OASX01001199
158068
Bacteroidota
GGG
Pro
>WENV180123621
OASX01000069
398828
Bacteroidota
CCG
Arg
>WENV180123664
OASX01000102
74084
Bacteroidota
CAG
Leu
>WENV180123631
OASX01000075
74084
Bacteroidota
CAG
Leu
>WENV180123951
OASX01000684
159415
Bacteroidota
TAC
Val
>WENV180123950
OASX01000684
159415
Bacteroidota
TAC
Val
>WENV180123557
OASX01000026
159415
Bacteroidota
TAC
Val
>WENV180123556
OASX01000026
159415
Bacteroidota
TAC
Val
>WENV180123657
OASX01000094
480325
Bacteroidota
CTG
Gln
>WENV180123656
OASX01000094
480325
Bacteroidota
CTG
Gln
>WENV180124607
OASX01041338
140771
Bacteroidota
>WENV180123762
OASX01000215
176192
Bacteroidota
TCT
Arg
>WENV180123807
OASX01000253
400088
Bacteroidota
GGT
Thr
>WENV180123820
OASX01000273
280446
Bacteroidota
TTT
Lys
>WENV180123837
OASX01000312
280446
Bacteroidota
TTT
Lys
>WENV180123843
OASX01000330
280446
Bacteroidota
TTT
Lys
>WENV180123575
OASX01000030
484496
Bacteroidota
TTG
Gln
>WENV180123749
OASX01000192
484496
Bacteroidota
TTG
Gln
>WENV180123599
OASX01000044
285750
Bacteroidota
CCC
Gly
>WENV180123734
OASX01000172
398836
Bacteroidota
GCA
Cys
>WENV180123763
OASX01000216
398836
Bacteroidota
GCA
Cys
>WENV180123830
OASX01000309
398836
Bacteroidota
GCA
Cys
>WENV180123877
OASX01000422
398836
Bacteroidota
GCA
Cys
>WENV180123902
OASX01000501
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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