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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180123559
OASX01000028
5699
Gammaproteobacteria
GCT
Ser
>WENV180124091
OASX01001889
179053
Gammaproteobacteria
TCT
Arg
>WENV180123636
OASX01000083
121754
Gammaproteobacteria
TAG
Leu
>WENV180124142
OASX01002423
83909
Gammaproteobacteria
CAG
Leu
>WENV180124029
OASX01001253
481188
Gammaproteobacteria
CCC
Gly
>WENV180124093
OASX01001889
400648
Gammaproteobacteria
TCC
Gly
>WENV180123738
OASX01000179
31109
Gammaproteobacteria
GGA
Ser
>WENV180123637
OASX01000083
401175
Gammaproteobacteria
TTG
Gln
>WENV180124158
OASX01002654
178818
Gammaproteobacteria
GAC
Val
>WENV180123654
OASX01000087
293263
Gammaproteobacteria
CTT
Lys
>WENV180124644
OASX01062083
435648
Gammaproteobacteria
CTG
Gln
>WENV180124112
OASX01002146
4023
Gammaproteobacteria
>WENV180123568
OASX01000029
76276
Gammaproteobacteria
TAA
Leu
>WENV180123574
OASX01000029
76276
Gammaproteobacteria
TAA
Leu
>WENV180124395
OASX01010789
336795
Gammaproteobacteria
GGT
Thr
>WENV180123635
OASX01000083
176541
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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