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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180128245
OATB01000008
398829
Bacteroidota
CCT
Arg
>WENV180128465
OATB01000162
398829
Bacteroidota
CCT
Arg
>WENV180128243
OATB01000007
175838
Bacteroidota
GTT
Asn
>WENV180128244
OATB01000007
175838
Bacteroidota
GTT
Asn
>WENV180128511
OATB01000237
73057
Bacteroidota
GAG
Leu
>WENV180128602
OATB01000413
280557
Bacteroidota
CAT
Met
>WENV180128936
OATB01008010
280557
Bacteroidota
CAT
Met
>WENV180128356
OATB01000062
20206
Bacteroidota
GGA
Ser
>WENV180128287
OATB01000029
201819
Bacteroidota
CAT
Met
>WENV180128253
OATB01000012
175903
Bacteroidota
GTG
His
>WENV180128242
OATB01000007
351598
Bacteroidota
CGG
Pro
>WENV180128292
OATB01000030
351598
Bacteroidota
CGG
Pro
>WENV180128783
OATB01001372
351598
Bacteroidota
CGG
Pro
>WENV180128941
OATB01008170
291612
Bacteroidota
>WENV180128239
OATB01000007
398872
Bacteroidota
GGT
Thr
>WENV180128397
OATB01000100
398872
Bacteroidota
GGT
Thr
>WENV180128274
OATB01000022
175936
Bacteroidota
CAT
Met
>WENV180128738
OATB01001013
56072
Bacteroidota
TAA
Leu
>WENV180128570
OATB01000352
57807
Bacteroidota
TGA
Ser
>WENV180128246
OATB01000009
57807
Bacteroidota
TGA
Ser
>WENV180128247
OATB01000009
57807
Bacteroidota
TGA
Ser
>WENV180128252
OATB01000012
57807
Bacteroidota
TGA
Ser
>WENV180128283
OATB01000027
57807
Bacteroidota
TGA
Ser
>WENV180128284
OATB01000027
57807
Bacteroidota
TGA
Ser
>WENV180128392
OATB01000091
175902
Bacteroidota
GGC
Ala
>WENV180128294
OATB01000031
398860
Bacteroidota
CTC
Glu
>WENV180128576
OATB01000363
480404
Bacteroidota
TTG
Gln
>WENV180128269
OATB01000020
280451
Bacteroidota
CGT
Thr
>WENV180128209
OATB01000001
99847
Bacteroidota
GTA
Tyr
>WENV180128238
OATB01000007
99847
Bacteroidota
GTA
Tyr
>WENV180128769
OATB01001269
99847
Bacteroidota
GTA
Tyr
>WENV180128226
OATB01000004
332896
Bacteroidota
TTT
Lys
>WENV180128263
OATB01000017
332896
Bacteroidota
TTT
Lys
>WENV180128289
OATB01000030
332896
Bacteroidota
TTT
Lys
>WENV180128371
OATB01000075
332896
Bacteroidota
TTT
Lys
>WENV180128355
OATB01000062
488746
Bacteroidota
CTG
Gln
>WENV180128271
OATB01000022
399026
Bacteroidota
CCT
Arg
>WENV180128544
OATB01000301
20766
Bacteroidota
GGA
Ser
>WENV180128906
OATB01005084
186108
Bacteroidota
GTT
Asn
>WENV180128768
OATB01001267
175844
Bacteroidota
GGC
Ala
>WENV180128408
OATB01000107
280532
Bacteroidota
>WENV180128281
OATB01000025
229246
Bacteroidota
GGC
Ala
>WENV180128329
OATB01000048
480318
Bacteroidota
CTG
Gln
>WENV180128330
OATB01000048
158068
Bacteroidota
GGG
Pro
>WENV180128535
OATB01000283
158068
Bacteroidota
GGG
Pro
>WENV180128618
OATB01000446
158068
Bacteroidota
GGG
Pro
>WENV180128944
OATB01008822
186142
Bacteroidota
GAT
Ile
>WENV180128268
OATB01000020
398828
Bacteroidota
CCG
Arg
>WENV180128318
OATB01000039
140771
Bacteroidota
>WENV180128315
OATB01000039
140771
Bacteroidota
>WENV180128320
OATB01000041
176192
Bacteroidota
TCT
Arg
>WENV180128340
OATB01000056
280446
Bacteroidota
TTT
Lys
>WENV180128211
OATB01000001
280446
Bacteroidota
TTT
Lys
>WENV180128331
OATB01000050
484496
Bacteroidota
TTG
Gln
>WENV180128577
OATB01000367
484496
Bacteroidota
TTG
Gln
>WENV180128915
OATB01005913
188555
Bacteroidota
CAT
Met
>WENV180128215
OATB01000002
117804
Bacteroidota
TAG
Leu
>WENV180128945
OATB01008822
186143
Bacteroidota
TGC
Ala
>WENV180128564
OATB01000344
398836
Bacteroidota
GCA
Cys
>WENV180128206
OATB01000001
398836
Bacteroidota
GCA
Cys
>WENV180128358
OATB01000063
398836
Bacteroidota
GCA
Cys
>WENV180128282
OATB01000026
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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