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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180143767
OATY01000252
481233
Actinomycetota
CCC
Gly
>WENV180143735
OATY01000162
175907
Actinomycetota
TAC
Val
>WENV180143846
OATY01000818
147829
Actinomycetota
TAA
Leu
>WENV180143679
OATY01000049
349003
Actinomycetota
CCG
Arg
>WENV180143705
OATY01000089
349003
Actinomycetota
CCG
Arg
>WENV180143746
OATY01000211
280498
Actinomycetota
GTT
Asn
>WENV180143851
OATY01000985
280498
Actinomycetota
GTT
Asn
>WENV180143738
OATY01000168
295964
Actinomycetota
GTT
Asn
>WENV180143725
OATY01000121
295964
Actinomycetota
GTT
Asn
>WENV180143760
OATY01000228
56083
Actinomycetota
CGA
Ser
>WENV180143693
OATY01000062
140768
Actinomycetota
TAG
Leu
>WENV180143711
OATY01000092
140768
Actinomycetota
TAG
Leu
>WENV180143864
OATY01001278
284890
Actinomycetota
CTT
Lys
>WENV180143737
OATY01000166
176075
Actinomycetota
TCT
Arg
>WENV180143696
OATY01000074
176075
Actinomycetota
TCT
Arg
>WENV180143739
OATY01000182
175848
Actinomycetota
TGG
Pro
>WENV180143850
OATY01000980
176078
Actinomycetota
GGG
Pro
>WENV180143829
OATY01000503
482604
Actinomycetota
TTG
Gln
>WENV180143807
OATY01000318
482604
Actinomycetota
TTG
Gln
>WENV180143919
OATY01004773
284889
Actinomycetota
CTC
Glu
>WENV180143842
OATY01000762
59689
Actinomycetota
GGA
Ser
>WENV180143806
OATY01000311
59689
Actinomycetota
GGA
Ser
>WENV180143728
OATY01000140
175837
Actinomycetota
ACG
Arg
>WENV180143727
OATY01000140
175837
Actinomycetota
ACG
Arg
>WENV180143687
OATY01000057
175837
Actinomycetota
ACG
Arg
>WENV180143686
OATY01000057
175837
Actinomycetota
ACG
Arg
>WENV180143699
OATY01000075
29393
Actinomycetota
GCT
Ser
>WENV180143657
OATY01000030
29393
Actinomycetota
GCT
Ser
>WENV180143682
OATY01000049
280549
Actinomycetota
CAC
Val
>WENV180143822
OATY01000444
280549
Actinomycetota
CAC
Val
>WENV180143935
OATY01008390
184493
Actinomycetota
GGG
Pro
>WENV180143744
OATY01000208
349164
Actinomycetota
CTC
Glu
>WENV180143763
OATY01000241
349164
Actinomycetota
CTC
Glu
>WENV180143741
OATY01000184
20450
Actinomycetota
GAG
Leu
>WENV180143695
OATY01000068
20450
Actinomycetota
GAG
Leu
>WENV180143684
OATY01000057
280702
Actinomycetota
GGC
Ala
>WENV180143685
OATY01000057
280702
Actinomycetota
GGC
Ala
>WENV180143857
OATY01001145
280702
Actinomycetota
GGC
Ala
>WENV180143858
OATY01001145
280702
Actinomycetota
GGC
Ala
>WENV180143681
OATY01000049
434162
Actinomycetota
GAC
Val
>WENV180143821
OATY01000444
434162
Actinomycetota
GAC
Val
>WENV180143900
OATY01003352
176077
Actinomycetota
CAT
Met
>WENV180143651
OATY01000027
176077
Actinomycetota
CAT
Met
>WENV180143764
OATY01000241
418858
Actinomycetota
CTG
Gln
>WENV180143745
OATY01000208
418858
Actinomycetota
CTG
Gln
>WENV180143879
OATY01001857
47453
Actinomycetota
GAG
Leu
>WENV180143907
OATY01003705
281635
Actinomycetota
GGC
Ala
>WENV180143885
OATY01002547
285876
Actinomycetota
CGT
Thr
>WENV180143828
OATY01000500
280524
Actinomycetota
TGC
Ala
>WENV180143769
OATY01000256
280524
Actinomycetota
TGC
Ala
>WENV180143747
OATY01000223
398948
Actinomycetota
TTC
Glu
>WENV180143653
OATY01000027
398948
Actinomycetota
TTC
Glu
>WENV180143823
OATY01000475
150272
Actinomycetota
TAA
Leu
>WENV180143655
OATY01000030
117777
Actinomycetota
>WENV180143697
OATY01000075
117777
Actinomycetota
>WENV180143862
OATY01001257
280744
Actinomycetota
GTG
His
>WENV180143656
OATY01000030
175949
Actinomycetota
CAT
Met
>WENV180143698
OATY01000075
175949
Actinomycetota
CAT
Met
>WENV180143726
OATY01000134
227544
Actinomycetota
TAC
Val
>WENV180143734
OATY01000161
191955
Actinomycetota
TGT
Thr
>WENV180143654
OATY01000028
191955
Actinomycetota
TGT
Thr
>WENV180143848
OATY01000869
180071
Actinomycetota
CAT
Met
>WENV180143777
OATY01000274
280544
Actinomycetota
GTG
His
>WENV180143834
OATY01000568
280544
Actinomycetota
GTG
His
>WENV180143712
OATY01000092
280496
Actinomycetota
CGT
Thr
>WENV180143717
OATY01000107
280703
Actinomycetota
CCT
Arg
>WENV180143652
OATY01000027
280703
Actinomycetota
CCT
Arg
>WENV180143878
OATY01001855
184157
Actinomycetota
TGG
Pro
>WENV180143707
OATY01000090
280450
Actinomycetota
TTT
Lys
>WENV180143866
OATY01001409
124580
Actinomycetota
GTA
Tyr
>WENV180143692
OATY01000062
323758
Actinomycetota
CGT
Thr
>WENV180143710
OATY01000092
323758
Actinomycetota
CGT
Thr
>WENV180143803
OATY01000305
56451
Actinomycetota
CGA
Ser
>WENV180143873
OATY01001726
284887
Actinomycetota
GCC
Gly
>WENV180143905
OATY01003500
99865
Actinomycetota
CAG
Leu
>WENV180143766
OATY01000252
99865
Actinomycetota
CAG
Leu
>WENV180143772
OATY01000265
222475
Actinomycetota
CTT
Lys
>WENV180143708
OATY01000090
222475
Actinomycetota
CTT
Lys
>WENV180143740
OATY01000182
175843
Actinomycetota
CAA
Leu
>WENV180143805
OATY01000310
175843
Actinomycetota
CAA
Leu
>WENV180143736
OATY01000165
56075
Actinomycetota
TGA
Ser
>WENV180143768
OATY01000256
179238
Actinomycetota
GAT
Ile
>WENV180143827
OATY01000500
179238
Actinomycetota
GAT
Ile
>WENV180143729
OATY01000147
60767
Actinomycetota
TGA
Ser
>WENV180143826
OATY01000497
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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