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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
110 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180151035
OAUO01000098
481233
Actinomycetota
CCC
Gly
>WENV180150993
OAUO01000069
176499
Actinomycetota
CAT
Met
>WENV180151214
OAUO01000581
175883
Actinomycetota
GAT
Ile
>WENV180151216
OAUO01000581
175883
Actinomycetota
GAT
Ile
>WENV180151210
OAUO01000573
175907
Actinomycetota
TAC
Val
>WENV180151157
OAUO01000313
147829
Actinomycetota
TAA
Leu
>WENV180151053
OAUO01000125
147806
Actinomycetota
TAA
Leu
>WENV180151181
OAUO01000391
280498
Actinomycetota
GTT
Asn
>WENV180150944
OAUO01000041
280498
Actinomycetota
GTT
Asn
>WENV180150945
OAUO01000041
280498
Actinomycetota
GTT
Asn
>WENV180151360
OAUO01002491
280503
Actinomycetota
CCT
Arg
>WENV180151173
OAUO01000346
295964
Actinomycetota
GTT
Asn
>WENV180151180
OAUO01000367
295964
Actinomycetota
GTT
Asn
>WENV180151377
OAUO01002801
295964
Actinomycetota
GTT
Asn
>WENV180151088
OAUO01000159
459899
Actinomycetota
TTC
Glu
>WENV180151156
OAUO01000311
140768
Actinomycetota
TAG
Leu
>WENV180151061
OAUO01000130
140768
Actinomycetota
TAG
Leu
>WENV180151135
OAUO01000270
176075
Actinomycetota
TCT
Arg
>WENV180151219
OAUO01000606
176075
Actinomycetota
TCT
Arg
>WENV180151376
OAUO01002782
175848
Actinomycetota
TGG
Pro
>WENV180151145
OAUO01000286
176078
Actinomycetota
GGG
Pro
>WENV180151166
OAUO01000345
152047
Actinomycetota
ACG
Arg
>WENV180151139
OAUO01000275
59689
Actinomycetota
GGA
Ser
>WENV180151220
OAUO01000610
59689
Actinomycetota
GGA
Ser
>WENV180151028
OAUO01000089
175837
Actinomycetota
ACG
Arg
>WENV180151029
OAUO01000089
175837
Actinomycetota
ACG
Arg
>WENV180151057
OAUO01000126
175837
Actinomycetota
ACG
Arg
>WENV180151058
OAUO01000126
175837
Actinomycetota
ACG
Arg
>WENV180151243
OAUO01000740
29393
Actinomycetota
GCT
Ser
>WENV180151027
OAUO01000088
29393
Actinomycetota
GCT
Ser
>WENV180151279
OAUO01001077
280549
Actinomycetota
CAC
Val
>WENV180151207
OAUO01000524
280549
Actinomycetota
CAC
Val
>WENV180151143
OAUO01000286
280549
Actinomycetota
CAC
Val
>WENV180151024
OAUO01000088
280549
Actinomycetota
CAC
Val
>WENV180151597
OAUO01032952
184493
Actinomycetota
GGG
Pro
>WENV180151437
OAUO01007834
443526
Actinomycetota
CAC
Val
>WENV180151221
OAUO01000610
349164
Actinomycetota
CTC
Glu
>WENV180151250
OAUO01000840
20450
Actinomycetota
GAG
Leu
>WENV180151178
OAUO01000366
20450
Actinomycetota
GAG
Leu
>WENV180151055
OAUO01000126
280702
Actinomycetota
GGC
Ala
>WENV180151056
OAUO01000126
280702
Actinomycetota
GGC
Ala
>WENV180151228
OAUO01000685
280702
Actinomycetota
GGC
Ala
>WENV180151229
OAUO01000685
280702
Actinomycetota
GGC
Ala
>WENV180151399
OAUO01004035
398843
Actinomycetota
GTT
Asn
>WENV180151398
OAUO01004035
398843
Actinomycetota
GTT
Asn
>WENV180151018
OAUO01000083
176077
Actinomycetota
CAT
Met
>WENV180151284
OAUO01001112
176077
Actinomycetota
CAT
Met
>WENV180151241
OAUO01000733
241064
Actinomycetota
CTC
Glu
>WENV180151298
OAUO01001416
241064
Actinomycetota
CTC
Glu
>WENV180151299
OAUO01001416
241064
Actinomycetota
CTC
Glu
>WENV180151311
OAUO01001595
241064
Actinomycetota
CTC
Glu
>WENV180151312
OAUO01001595
241064
Actinomycetota
CTC
Glu
>WENV180151014
OAUO01000080
176638
Actinomycetota
GGG
Pro
>WENV180150976
OAUO01000063
280524
Actinomycetota
TGC
Ala
>WENV180151065
OAUO01000131
280524
Actinomycetota
TGC
Ala
>WENV180151330
OAUO01001809
280524
Actinomycetota
TGC
Ala
>WENV180151308
OAUO01001577
481719
Actinomycetota
GCA
Cys
>WENV180151048
OAUO01000116
398948
Actinomycetota
TTC
Glu
>WENV180151287
OAUO01001137
398948
Actinomycetota
TTC
Glu
>WENV180151126
OAUO01000245
176723
Actinomycetota
TCT
Arg
>WENV180151309
OAUO01001577
291585
Actinomycetota
GCC
Gly
>WENV180151307
OAUO01001577
291585
Actinomycetota
GCC
Gly
>WENV180151295
OAUO01001366
291585
Actinomycetota
GCC
Gly
>WENV180151393
OAUO01003548
150272
Actinomycetota
TAA
Leu
>WENV180151025
OAUO01000088
117777
Actinomycetota
>WENV180150977
OAUO01000063
280523
Actinomycetota
GGC
Ala
>WENV180151179
OAUO01000367
280523
Actinomycetota
GGC
Ala
>WENV180151026
OAUO01000088
175949
Actinomycetota
CAT
Met
>WENV180151208
OAUO01000526
227544
Actinomycetota
TAC
Val
>WENV180151095
OAUO01000181
176555
Actinomycetota
CAT
Met
>WENV180151063
OAUO01000131
191955
Actinomycetota
TGT
Thr
>WENV180151505
OAUO01012949
280544
Actinomycetota
GTG
His
>WENV180151411
OAUO01004890
280536
Actinomycetota
CTT
Lys
>WENV180151410
OAUO01004890
280536
Actinomycetota
CTT
Lys
>WENV180151272
OAUO01001053
280496
Actinomycetota
CGT
Thr
>WENV180151185
OAUO01000421
280703
Actinomycetota
CCT
Arg
>WENV180151019
OAUO01000083
280703
Actinomycetota
CCT
Arg
>WENV180151318
OAUO01001712
175926
Actinomycetota
CAT
Met
>WENV180150953
OAUO01000047
280450
Actinomycetota
TTT
Lys
>WENV180151280
OAUO01001086
280450
Actinomycetota
TTT
Lys
>WENV180151278
OAUO01001077
468141
Actinomycetota
GAC
Val
>WENV180151206
OAUO01000524
468141
Actinomycetota
GAC
Val
>WENV180151142
OAUO01000286
468141
Actinomycetota
GAC
Val
>WENV180151023
OAUO01000088
468141
Actinomycetota
GAC
Val
>WENV180151155
OAUO01000311
323758
Actinomycetota
CGT
Thr
>WENV180151102
OAUO01000201
56166
Actinomycetota
TGA
Ser
>WENV180151187
OAUO01000442
358727
Actinomycetota
CCG
Arg
>WENV180151017
OAUO01000082
358727
Actinomycetota
CCG
Arg
>WENV180151240
OAUO01000733
483206
Actinomycetota
CTG
Gln
>WENV180151154
OAUO01000303
175882
Actinomycetota
TGG
Pro
>WENV180151436
OAUO01007834
512744
Actinomycetota
GCA
Cys
>WENV180151036
OAUO01000098
99865
Actinomycetota
CAG
Leu
>WENV180151288
OAUO01001144
222475
Actinomycetota
CTT
Lys
>WENV180150924
OAUO01000030
480319
Actinomycetota
TTG
Gln
>WENV180150888
OAUO01000005
280499
Actinomycetota
CCT
Arg
>WENV180151045
OAUO01000108
398853
Actinomycetota
CTG
Gln
>WENV180151222
OAUO01000610
398853
Actinomycetota
CTG
Gln
>WENV180151153
OAUO01000303
176642
Actinomycetota
CAA
Leu
>WENV180151226
OAUO01000647
175843
Actinomycetota
CAA
Leu
>WENV180150887
OAUO01000005
237585
Actinomycetota
TAC
Val
>WENV180151604
OAUO01033830
371116
Actinomycetota
GGC
Ala
>WENV180150989
OAUO01000069
46642
Actinomycetota
CGA
Ser
>WENV180150974
OAUO01000063
104211
Actinomycetota
CAG
Leu
>WENV180150992
OAUO01000069
117903
Actinomycetota
GTA
Tyr
>WENV180151064
OAUO01000131
179238
Actinomycetota
GAT
Ile
>WENV180151329
OAUO01001809
179238
Actinomycetota
GAT
Ile
>WENV180151159
OAUO01000332
60767
Actinomycetota
TGA
Ser
>WENV180151054
OAUO01000126
506175
Actinomycetota
TTG
Gln
>WENV180151227
OAUO01000685
506175
Actinomycetota
TTG
Gln
>WENV180151060
OAUO01000130
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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