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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
75 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180154951
OAUU01001225
179231
Actinomycetota
TAC
Val
>WENV180154914
OAUU01001043
176499
Actinomycetota
CAT
Met
>WENV180155069
OAUU01002967
175883
Actinomycetota
GAT
Ile
>WENV180154644
OAUU01000234
175907
Actinomycetota
TAC
Val
>WENV180154857
OAUU01000807
280498
Actinomycetota
GTT
Asn
>WENV180154911
OAUU01001037
280498
Actinomycetota
GTT
Asn
>WENV180154926
OAUU01001091
280498
Actinomycetota
GTT
Asn
>WENV180154927
OAUU01001091
280498
Actinomycetota
GTT
Asn
>WENV180154979
OAUU01001435
280498
Actinomycetota
GTT
Asn
>WENV180155422
OAUU01071768
280503
Actinomycetota
CCT
Arg
>WENV180154980
OAUU01001435
295964
Actinomycetota
GTT
Asn
>WENV180155179
OAUU01006140
459899
Actinomycetota
TTC
Glu
>WENV180154865
OAUU01000852
56083
Actinomycetota
CGA
Ser
>WENV180154799
OAUU01000557
140768
Actinomycetota
TAG
Leu
>WENV180155122
OAUU01004430
140768
Actinomycetota
TAG
Leu
>WENV180154847
OAUU01000764
176075
Actinomycetota
TCT
Arg
>WENV180154934
OAUU01001118
175848
Actinomycetota
TGG
Pro
>WENV180154701
OAUU01000344
176078
Actinomycetota
GGG
Pro
>WENV180154876
OAUU01000882
152047
Actinomycetota
ACG
Arg
>WENV180154786
OAUU01000534
59689
Actinomycetota
GGA
Ser
>WENV180154866
OAUU01000854
175837
Actinomycetota
ACG
Arg
>WENV180154867
OAUU01000854
175837
Actinomycetota
ACG
Arg
>WENV180154834
OAUU01000688
29393
Actinomycetota
GCT
Ser
>WENV180154699
OAUU01000344
280549
Actinomycetota
CAC
Val
>WENV180154971
OAUU01001341
280549
Actinomycetota
CAC
Val
>WENV180155040
OAUU01002472
349164
Actinomycetota
CTC
Glu
>WENV180155095
OAUU01003571
280441
Actinomycetota
CCG
Arg
>WENV180154890
OAUU01000911
280702
Actinomycetota
GGC
Ala
>WENV180154891
OAUU01000911
280702
Actinomycetota
GGC
Ala
>WENV180155159
OAUU01005427
398843
Actinomycetota
GTT
Asn
>WENV180155010
OAUU01002071
176077
Actinomycetota
CAT
Met
>WENV180154753
OAUU01000451
21508
Actinomycetota
GAG
Leu
>WENV180155082
OAUU01003328
241064
Actinomycetota
CTC
Glu
>WENV180154925
OAUU01001083
176638
Actinomycetota
GGG
Pro
>WENV180154931
OAUU01001097
280524
Actinomycetota
TGC
Ala
>WENV180154937
OAUU01001135
280524
Actinomycetota
TGC
Ala
>WENV180154845
OAUU01000760
398948
Actinomycetota
TTC
Glu
>WENV180154880
OAUU01000882
480374
Actinomycetota
TTG
Gln
>WENV180154672
OAUU01000294
150272
Actinomycetota
TAA
Leu
>WENV180154826
OAUU01000638
117777
Actinomycetota
>WENV180154938
OAUU01001135
280523
Actinomycetota
GGC
Ala
>WENV180155004
OAUU01001846
280523
Actinomycetota
GGC
Ala
>WENV180154827
OAUU01000638
175949
Actinomycetota
CAT
Met
>WENV180154967
OAUU01001311
191955
Actinomycetota
TGT
Thr
>WENV180154830
OAUU01000667
175841
Actinomycetota
TAT
Ile
>WENV180154981
OAUU01001442
280544
Actinomycetota
GTG
His
>WENV180154800
OAUU01000557
280496
Actinomycetota
CGT
Thr
>WENV180154671
OAUU01000289
280703
Actinomycetota
CCT
Arg
>WENV180154759
OAUU01000456
20205
Actinomycetota
GCT
Ser
>WENV180155217
OAUU01008628
175926
Actinomycetota
CAT
Met
>WENV180154825
OAUU01000629
280450
Actinomycetota
TTT
Lys
>WENV180154698
OAUU01000344
468141
Actinomycetota
GAC
Val
>WENV180154970
OAUU01001341
468141
Actinomycetota
GAC
Val
>WENV180154798
OAUU01000557
323758
Actinomycetota
CGT
Thr
>WENV180154820
OAUU01000591
358727
Actinomycetota
CCG
Arg
>WENV180154868
OAUU01000858
480329
Actinomycetota
CCC
Gly
>WENV180155081
OAUU01003328
483206
Actinomycetota
CTG
Gln
>WENV180154689
OAUU01000318
175882
Actinomycetota
TGG
Pro
>WENV180154719
OAUU01000393
20209
Actinomycetota
GAG
Leu
>WENV180154748
OAUU01000430
222475
Actinomycetota
CTT
Lys
>WENV180155047
OAUU01002603
480319
Actinomycetota
TTG
Gln
>WENV180154831
OAUU01000668
280499
Actinomycetota
CCT
Arg
>WENV180155041
OAUU01002472
398853
Actinomycetota
CTG
Gln
>WENV180154935
OAUU01001118
175843
Actinomycetota
CAA
Leu
>WENV180154968
OAUU01001339
203883
Actinomycetota
TCT
Arg
>WENV180154978
OAUU01001414
56075
Actinomycetota
TGA
Ser
>WENV180154886
OAUU01000902
46642
Actinomycetota
CGA
Ser
>WENV180154997
OAUU01001735
104211
Actinomycetota
CAG
Leu
>WENV180154913
OAUU01001043
117903
Actinomycetota
GTA
Tyr
>WENV180155096
OAUU01003591
56071
Actinomycetota
TGA
Ser
>WENV180154930
OAUU01001097
179238
Actinomycetota
GAT
Ile
>WENV180154965
OAUU01001280
147796
Actinomycetota
TAA
Leu
>WENV180154889
OAUU01000911
506175
Actinomycetota
TTG
Gln
>WENV180155121
OAUU01004430
280470
Actinomycetota
CGT
Thr
>WENV180154943
OAUU01001162
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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