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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180161410
OAVE01000001
295385
Bacteroidota
CCA
Trp
>WENV180161472
OAVE01000055
117741
Bacteroidota
TAG
Leu
>WENV180161404
OAVE01000001
398829
Bacteroidota
CCT
Arg
>WENV180161402
OAVE01000001
175838
Bacteroidota
GTT
Asn
>WENV180161403
OAVE01000001
175838
Bacteroidota
GTT
Asn
>WENV180161561
OAVE01000251
280557
Bacteroidota
CAT
Met
>WENV180161490
OAVE01000094
20492
Bacteroidota
GGA
Ser
>WENV180161446
OAVE01000020
20206
Bacteroidota
GGA
Ser
>WENV180161473
OAVE01000057
175903
Bacteroidota
GTG
His
>WENV180161562
OAVE01000258
29791
Bacteroidota
GCT
Ser
>WENV180161406
OAVE01000001
56072
Bacteroidota
TAA
Leu
>WENV180161546
OAVE01000222
57807
Bacteroidota
TGA
Ser
>WENV180161458
OAVE01000034
57807
Bacteroidota
TGA
Ser
>WENV180161424
OAVE01000006
175902
Bacteroidota
GGC
Ala
>WENV180161563
OAVE01000258
398860
Bacteroidota
CTC
Glu
>WENV180161467
OAVE01000044
280451
Bacteroidota
CGT
Thr
>WENV180161434
OAVE01000012
99847
Bacteroidota
GTA
Tyr
>WENV180161408
OAVE01000001
99847
Bacteroidota
GTA
Tyr
>WENV180161507
OAVE01000120
175844
Bacteroidota
GGC
Ala
>WENV180161444
OAVE01000020
158068
Bacteroidota
GGG
Pro
>WENV180161425
OAVE01000007
398828
Bacteroidota
CCG
Arg
>WENV180161550
OAVE01000230
140771
Bacteroidota
>WENV180161604
OAVE01000442
280446
Bacteroidota
TTT
Lys
>WENV180161433
OAVE01000012
280446
Bacteroidota
TTT
Lys
>WENV180161484
OAVE01000073
484496
Bacteroidota
TTG
Gln
>WENV180161426
OAVE01000008
484496
Bacteroidota
TTG
Gln
>WENV180161435
OAVE01000013
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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