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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
133 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180164825
OAVJ01018891
280500
Bacillota
TGC
Ala
>WENV180164884
OAVJ01032925
280500
Bacillota
TGC
Ala
>WENV180164886
OAVJ01035053
280500
Bacillota
TGC
Ala
>WENV180164811
OAVJ01016475
480520
Bacillota
TCC
Gly
>WENV180164861
OAVJ01025731
405363
Bacillota
GCA
Cys
>WENV180164826
OAVJ01019383
487050
Bacillota
TCC
Gly
>WENV180164492
OAVJ01002258
290391
Bacillota
TAC
Val
>WENV180164496
OAVJ01002258
290391
Bacillota
TAC
Val
>WENV180164550
OAVJ01002790
290391
Bacillota
TAC
Val
>WENV180164972
OAVJ01071731
290391
Bacillota
TAC
Val
>WENV180164975
OAVJ01074615
280428
Bacillota
GAA
Phe
>WENV180164628
OAVJ01004140
280428
Bacillota
GAA
Phe
>WENV180164582
OAVJ01003383
280428
Bacillota
GAA
Phe
>WENV180164268
OAVJ01000397
280428
Bacillota
GAA
Phe
>WENV180164156
OAVJ01000163
291579
Bacillota
GAA
Phe
>WENV180164196
OAVJ01000205
291579
Bacillota
GAA
Phe
>WENV180164546
OAVJ01002722
302145
Bacillota
GAA
Phe
>WENV180164589
OAVJ01003510
302145
Bacillota
GAA
Phe
>WENV180164870
OAVJ01028650
302145
Bacillota
GAA
Phe
>WENV180164266
OAVJ01000397
280466
Bacillota
TAC
Val
>WENV180164346
OAVJ01000872
280492
Bacillota
CTT
Lys
>WENV180164101
OAVJ01000081
280492
Bacillota
CTT
Lys
>WENV180164587
OAVJ01003489
175842
Bacillota
CAC
Val
>WENV180164251
OAVJ01000335
175842
Bacillota
CAC
Val
>WENV180164218
OAVJ01000258
29930
Bacillota
GGA
Ser
>WENV180164571
OAVJ01003104
184497
Bacillota
GGG
Pro
>WENV180164912
OAVJ01044408
194260
Bacillota
GAT
Ile
>WENV180164845
OAVJ01022785
179563
Bacillota
GAT
Ile
>WENV180164819
OAVJ01018022
179176
Bacillota
ACG
Arg
>WENV180164844
OAVJ01022785
295166
Bacillota
TGC
Ala
>WENV180164576
OAVJ01003228
190476
Bacillota
CAT
Met
>WENV180164502
OAVJ01002310
190476
Bacillota
CAT
Met
>WENV180164149
OAVJ01000145
73664
Bacillota
CAG
Leu
>WENV180164368
OAVJ01000972
280447
Bacillota
GAC
Val
>WENV180164325
OAVJ01000751
280447
Bacillota
GAC
Val
>WENV180164565
OAVJ01002949
5692
Bacillota
GCT
Ser
>WENV180164413
OAVJ01001353
5692
Bacillota
GCT
Ser
>WENV180164451
OAVJ01001757
184171
Bacillota
CAT
Met
>WENV180164598
OAVJ01003686
175825
Bacillota
GAT
Ile
>WENV180164816
OAVJ01016807
284723
Bacillota
TAC
Val
>WENV180164852
OAVJ01024778
73009
Bacillota
CAG
Leu
>WENV180164686
OAVJ01006476
73009
Bacillota
CAG
Leu
>WENV180164541
OAVJ01002685
73009
Bacillota
CAG
Leu
>WENV180164535
OAVJ01002540
73009
Bacillota
CAG
Leu
>WENV180164278
OAVJ01000451
487804
Bacillota
GGT
Thr
>WENV180164814
OAVJ01016475
283502
Bacillota
TTT
Lys
>WENV180164810
OAVJ01016475
402717
Bacillota
TTC
Glu
>WENV180164987
OAVJ01081093
402717
Bacillota
TTC
Glu
>WENV180164217
OAVJ01000257
291581
Bacillota
CGG
Pro
>WENV180164206
OAVJ01000229
291581
Bacillota
CGG
Pro
>WENV180164569
OAVJ01003079
175859
Bacillota
TCT
Arg
>WENV180164797
OAVJ01014087
398835
Bacillota
GCC
Gly
>WENV180164409
OAVJ01001313
398835
Bacillota
GCC
Gly
>WENV180164597
OAVJ01003686
280436
Bacillota
TGC
Ala
>WENV180164927
OAVJ01049552
175847
Bacillota
GTC
Asp
>WENV180164879
OAVJ01031700
175831
Bacillota
ACG
Arg
>WENV180164647
OAVJ01004961
175831
Bacillota
ACG
Arg
>WENV180164432
OAVJ01001551
284627
Bacillota
GAA
Phe
>WENV180164372
OAVJ01001015
294020
Bacillota
TAC
Val
>WENV180164883
OAVJ01032925
175916
Bacillota
GAT
Ile
>WENV180164624
OAVJ01004112
484885
Bacillota
TCC
Gly
>WENV180164338
OAVJ01000820
480322
Bacillota
CTG
Gln
>WENV180164216
OAVJ01000257
480322
Bacillota
CTG
Gln
>WENV180164205
OAVJ01000229
480322
Bacillota
CTG
Gln
>WENV180164173
OAVJ01000183
480322
Bacillota
CTG
Gln
>WENV180164240
OAVJ01000314
401685
Bacillota
TTG
Gln
>WENV180164449
OAVJ01001752
175868
Bacillota
GTT
Asn
>WENV180164405
OAVJ01001257
175868
Bacillota
GTT
Asn
>WENV180164274
OAVJ01000409
175868
Bacillota
GTT
Asn
>WENV180164125
OAVJ01000107
175868
Bacillota
GTT
Asn
>WENV180164749
OAVJ01010193
119278
Bacillota
TAG
Leu
>WENV180164448
OAVJ01001752
398854
Bacillota
CTC
Glu
>WENV180164404
OAVJ01001257
398854
Bacillota
CTC
Glu
>WENV180164387
OAVJ01001135
291576
Bacillota
CCC
Gly
>WENV180164985
OAVJ01080260
287280
Bacillota
TGT
Thr
>WENV180164627
OAVJ01004129
480324
Bacillota
TTG
Gln
>WENV180164716
OAVJ01008377
175899
Bacillota
GTC
Asp
>WENV180164257
OAVJ01000393
175899
Bacillota
GTC
Asp
>WENV180164147
OAVJ01000141
56079
Bacillota
AAG
Leu
>WENV180164146
OAVJ01000141
56079
Bacillota
AAG
Leu
>WENV180164475
OAVJ01001980
175911
Bacillota
GTC
Asp
>WENV180164694
OAVJ01006950
292374
Bacillota
TGC
Ala
>WENV180164874
OAVJ01029523
186051
Bacillota
GAT
Ile
>WENV180165001
OAVJ01083516
398857
Bacillota
TTC
Glu
>WENV180164260
OAVJ01000393
117745
Bacillota
GTA
Tyr
>WENV180164087
OAVJ01000054
117745
Bacillota
GTA
Tyr
>WENV180164623
OAVJ01004097
280444
Bacillota
GGT
Thr
>WENV180164622
OAVJ01004097
280444
Bacillota
GGT
Thr
>WENV180164440
OAVJ01001630
280444
Bacillota
GGT
Thr
>WENV180164351
OAVJ01000913
280444
Bacillota
GGT
Thr
>WENV180164914
OAVJ01045727
291597
Bacillota
TGC
Ala
>WENV180164740
OAVJ01009663
46643
Bacillota
TGA
Ser
>WENV180164310
OAVJ01000644
46643
Bacillota
TGA
Ser
>WENV180164722
OAVJ01008538
179755
Bacillota
CCG
Arg
>WENV180164195
OAVJ01000205
58120
Bacillota
AAG
Leu
>WENV180164235
OAVJ01000311
58120
Bacillota
AAG
Leu
>WENV180164858
OAVJ01025233
46835
Bacillota
TAA
Leu
>WENV180164577
OAVJ01003228
398832
Bacillota
TTC
Glu
>WENV180164503
OAVJ01002310
398832
Bacillota
TTC
Glu
>WENV180164977
OAVJ01075606
203851
Bacillota
TCT
Arg
>WENV180164771
OAVJ01010804
118669
Bacillota
GTA
Tyr
>WENV180164980
OAVJ01076919
175915
Bacillota
GTC
Asp
>WENV180164727
OAVJ01009055
280476
Bacillota
TTT
Lys
>WENV180164262
OAVJ01000393
280462
Bacillota
GAA
Phe
>WENV180164099
OAVJ01000080
280462
Bacillota
GAA
Phe
>WENV180164441
OAVJ01001636
398852
Bacillota
CTC
Glu
>WENV180164207
OAVJ01000232
398852
Bacillota
CTC
Glu
>WENV180164057
OAVJ01000033
398852
Bacillota
CTC
Glu
>WENV180164024
OAVJ01000004
398852
Bacillota
CTC
Glu
>WENV180164157
OAVJ01000163
309916
Bacillota
TTT
Lys
>WENV180164989
OAVJ01081863
118359
Bacillota
GTA
Tyr
>WENV180164693
OAVJ01006950
201856
Bacillota
GAT
Ile
>WENV180164239
OAVJ01000314
175857
Bacillota
GTG
His
>WENV180164192
OAVJ01000202
175857
Bacillota
GTG
His
>WENV180164499
OAVJ01002258
285756
Bacillota
GCC
Gly
>WENV180164495
OAVJ01002258
285756
Bacillota
GCC
Gly
>WENV180164357
OAVJ01000967
398833
Bacillota
TGT
Thr
>WENV180164994
OAVJ01082222
175849
Bacillota
GTC
Asp
>WENV180164621
OAVJ01004097
175849
Bacillota
GTC
Asp
>WENV180164439
OAVJ01001630
175849
Bacillota
GTC
Asp
>WENV180164267
OAVJ01000397
175849
Bacillota
GTC
Asp
>WENV180164227
OAVJ01000267
175849
Bacillota
GTC
Asp
>WENV180164888
OAVJ01035551
317820
Bacillota
TAC
Val
>WENV180164263
OAVJ01000393
280463
Bacillota
TTT
Lys
>WENV180164194
OAVJ01000202
280463
Bacillota
TTT
Lys
>WENV180164805
OAVJ01015380
280486
Bacillota
TGC
Ala
>WENV180164808
OAVJ01016324
280486
Bacillota
TGC
Ala
>WENV180164872
OAVJ01029208
280486
Bacillota
TGC
Ala
>WENV180164895
OAVJ01038667
280486
Bacillota
TGC
Ala
>WENV180164564
OAVJ01002949
56074
Bacillota
TGA
Ser
>WENV180164412
OAVJ01001353
56074
Bacillota
TGA
Ser
>WENV180164374
OAVJ01001024
280473
Bacillota
TGG
Pro
>WENV180164335
OAVJ01000803
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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