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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180169650
OAVT01000012
295385
Bacteroidota
CCA
Trp
>WENV180169624
OAVT01000004
117741
Bacteroidota
TAG
Leu
>WENV180169621
OAVT01000002
398829
Bacteroidota
CCT
Arg
>WENV180169653
OAVT01000012
175838
Bacteroidota
GTT
Asn
>WENV180169654
OAVT01000012
175838
Bacteroidota
GTT
Asn
>WENV180169871
OAVT01001837
175904
Bacteroidota
CGG
Pro
>WENV180169752
OAVT01000132
280557
Bacteroidota
CAT
Met
>WENV180169626
OAVT01000005
20206
Bacteroidota
GGA
Ser
>WENV180169658
OAVT01000016
175903
Bacteroidota
GTG
His
>WENV180169817
OAVT01000538
118089
Bacteroidota
TAG
Leu
>WENV180169887
OAVT01002972
175908
Bacteroidota
GTC
Asp
>WENV180169859
OAVT01001215
20449
Bacteroidota
GGA
Ser
>WENV180169620
OAVT01000002
56072
Bacteroidota
TAA
Leu
>WENV180169767
OAVT01000191
57807
Bacteroidota
TGA
Ser
>WENV180169657
OAVT01000016
57807
Bacteroidota
TGA
Ser
>WENV180169640
OAVT01000007
175902
Bacteroidota
GGC
Ala
>WENV180169614
OAVT01000001
280451
Bacteroidota
CGT
Thr
>WENV180169648
OAVT01000012
99847
Bacteroidota
GTA
Tyr
>WENV180169645
OAVT01000010
99847
Bacteroidota
GTA
Tyr
>WENV180169861
OAVT01001295
399200
Bacteroidota
CAT
Met
>WENV180169942
OAVT01015415
280478
Bacteroidota
GCC
Gly
>WENV180169627
OAVT01000005
158068
Bacteroidota
GGG
Pro
>WENV180169613
OAVT01000001
398828
Bacteroidota
CCG
Arg
>WENV180169633
OAVT01000006
140771
Bacteroidota
>WENV180169630
OAVT01000006
140771
Bacteroidota
>WENV180169806
OAVT01000449
176192
Bacteroidota
TCT
Arg
>WENV180169693
OAVT01000040
280446
Bacteroidota
TTT
Lys
>WENV180169628
OAVT01000005
280446
Bacteroidota
TTT
Lys
>WENV180169715
OAVT01000067
484496
Bacteroidota
TTG
Gln
>WENV180169819
OAVT01000587
398836
Bacteroidota
GCA
Cys
>WENV180169635
OAVT01000007
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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