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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
98 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180177829
OAWF01001171
481233
Actinomycetota
CCC
Gly
>WENV180177394
OAWF01000004
179231
Actinomycetota
TAC
Val
>WENV180177705
OAWF01000424
176499
Actinomycetota
CAT
Met
>WENV180177533
OAWF01000120
175907
Actinomycetota
TAC
Val
>WENV180177688
OAWF01000398
147829
Actinomycetota
TAA
Leu
>WENV180177551
OAWF01000139
147806
Actinomycetota
TAA
Leu
>WENV180177817
OAWF01000964
280498
Actinomycetota
GTT
Asn
>WENV180177816
OAWF01000964
280498
Actinomycetota
GTT
Asn
>WENV180177579
OAWF01000179
280498
Actinomycetota
GTT
Asn
>WENV180177437
OAWF01000022
280498
Actinomycetota
GTT
Asn
>WENV180177435
OAWF01000022
280498
Actinomycetota
GTT
Asn
>WENV180177434
OAWF01000022
280498
Actinomycetota
GTT
Asn
>WENV180177992
OAWF01010200
295964
Actinomycetota
GTT
Asn
>WENV180177776
OAWF01000671
56083
Actinomycetota
CGA
Ser
>WENV180177410
OAWF01000009
140768
Actinomycetota
TAG
Leu
>WENV180177601
OAWF01000224
140768
Actinomycetota
TAG
Leu
>WENV180177608
OAWF01000237
140768
Actinomycetota
TAG
Leu
>WENV180177780
OAWF01000712
176075
Actinomycetota
TCT
Arg
>WENV180177643
OAWF01000305
176075
Actinomycetota
TCT
Arg
>WENV180177496
OAWF01000067
175848
Actinomycetota
TGG
Pro
>WENV180177767
OAWF01000625
176078
Actinomycetota
GGG
Pro
>WENV180177741
OAWF01000529
482604
Actinomycetota
TTG
Gln
>WENV180177495
OAWF01000067
482604
Actinomycetota
TTG
Gln
>WENV180177727
OAWF01000489
152047
Actinomycetota
ACG
Arg
>WENV180177545
OAWF01000132
59689
Actinomycetota
GGA
Ser
>WENV180177595
OAWF01000208
59689
Actinomycetota
GGA
Ser
>WENV180177501
OAWF01000067
175837
Actinomycetota
ACG
Arg
>WENV180177500
OAWF01000067
175837
Actinomycetota
ACG
Arg
>WENV180177456
OAWF01000035
175837
Actinomycetota
ACG
Arg
>WENV180177455
OAWF01000035
175837
Actinomycetota
ACG
Arg
>WENV180177777
OAWF01000696
29393
Actinomycetota
GCT
Ser
>WENV180177770
OAWF01000637
29393
Actinomycetota
GCT
Ser
>WENV180177613
OAWF01000238
280549
Actinomycetota
CAC
Val
>WENV180177618
OAWF01000239
280549
Actinomycetota
CAC
Val
>WENV180177796
OAWF01000822
280549
Actinomycetota
CAC
Val
>WENV180177598
OAWF01000220
20450
Actinomycetota
GAG
Leu
>WENV180177596
OAWF01000211
20450
Actinomycetota
GAG
Leu
>WENV180177498
OAWF01000067
280702
Actinomycetota
GGC
Ala
>WENV180177499
OAWF01000067
280702
Actinomycetota
GGC
Ala
>WENV180177742
OAWF01000529
280702
Actinomycetota
GGC
Ala
>WENV180177743
OAWF01000529
280702
Actinomycetota
GGC
Ala
>WENV180177510
OAWF01000078
176077
Actinomycetota
CAT
Met
>WENV180177750
OAWF01000557
176077
Actinomycetota
CAT
Met
>WENV180177422
OAWF01000013
176638
Actinomycetota
GGG
Pro
>WENV180177567
OAWF01000160
280524
Actinomycetota
TGC
Ala
>WENV180177520
OAWF01000093
280524
Actinomycetota
TGC
Ala
>WENV180177447
OAWF01000032
280524
Actinomycetota
TGC
Ala
>WENV180177758
OAWF01000597
398948
Actinomycetota
TTC
Glu
>WENV180177623
OAWF01000248
398948
Actinomycetota
TTC
Glu
>WENV180177731
OAWF01000489
480374
Actinomycetota
TTG
Gln
>WENV180177679
OAWF01000383
150272
Actinomycetota
TAA
Leu
>WENV180177946
OAWF01004643
117777
Actinomycetota
>WENV180177436
OAWF01000022
280523
Actinomycetota
GGC
Ala
>WENV180177521
OAWF01000093
280523
Actinomycetota
GGC
Ala
>WENV180177947
OAWF01004643
175949
Actinomycetota
CAT
Met
>WENV180177452
OAWF01000034
176555
Actinomycetota
CAT
Met
>WENV180177795
OAWF01000822
418252
Actinomycetota
GAC
Val
>WENV180177617
OAWF01000239
418252
Actinomycetota
GAC
Val
>WENV180177612
OAWF01000238
418252
Actinomycetota
GAC
Val
>WENV180177565
OAWF01000160
191955
Actinomycetota
TGT
Thr
>WENV180177448
OAWF01000032
191955
Actinomycetota
TGT
Thr
>WENV180177963
OAWF01006378
280544
Actinomycetota
GTG
His
>WENV180177609
OAWF01000237
280496
Actinomycetota
CGT
Thr
>WENV180177605
OAWF01000232
280703
Actinomycetota
CCT
Arg
>WENV180177511
OAWF01000078
280703
Actinomycetota
CCT
Arg
>WENV180177406
OAWF01000009
280450
Actinomycetota
TTT
Lys
>WENV180177544
OAWF01000132
280450
Actinomycetota
TTT
Lys
>WENV180177594
OAWF01000208
280450
Actinomycetota
TTT
Lys
>WENV180177600
OAWF01000224
323758
Actinomycetota
CGT
Thr
>WENV180177607
OAWF01000237
323758
Actinomycetota
CGT
Thr
>WENV180177515
OAWF01000085
56166
Actinomycetota
TGA
Ser
>WENV180177737
OAWF01000510
480329
Actinomycetota
CCC
Gly
>WENV180177506
OAWF01000073
56451
Actinomycetota
CGA
Ser
>WENV180177774
OAWF01000652
175882
Actinomycetota
TGG
Pro
>WENV180177639
OAWF01000291
58099
Actinomycetota
TGA
Ser
>WENV180177772
OAWF01000639
99865
Actinomycetota
CAG
Leu
>WENV180177416
OAWF01000013
480319
Actinomycetota
TTG
Gln
>WENV180177395
OAWF01000004
280499
Actinomycetota
CCT
Arg
>WENV180177543
OAWF01000132
398853
Actinomycetota
CTG
Gln
>WENV180177408
OAWF01000009
398853
Actinomycetota
CTG
Gln
>WENV180177756
OAWF01000589
176642
Actinomycetota
CAA
Leu
>WENV180177497
OAWF01000067
175843
Actinomycetota
CAA
Leu
>WENV180177453
OAWF01000034
203883
Actinomycetota
TCT
Arg
>WENV180177517
OAWF01000085
46642
Actinomycetota
CGA
Ser
>WENV180177773
OAWF01000643
317680
Actinomycetota
CCG
Arg
>WENV180177739
OAWF01000523
317680
Actinomycetota
CCG
Arg
>WENV180177621
OAWF01000244
317680
Actinomycetota
CCG
Arg
>WENV180177593
OAWF01000208
430848
Actinomycetota
CTG
Gln
>WENV180177542
OAWF01000132
289788
Actinomycetota
CTC
Glu
>WENV180177592
OAWF01000208
289788
Actinomycetota
CTC
Glu
>WENV180177704
OAWF01000424
117903
Actinomycetota
GTA
Tyr
>WENV180177446
OAWF01000032
179238
Actinomycetota
GAT
Ile
>WENV180177566
OAWF01000160
179238
Actinomycetota
GAT
Ile
>WENV180177507
OAWF01000073
60767
Actinomycetota
TGA
Ser
>WENV180177409
OAWF01000009
280470
Actinomycetota
CGT
Thr
>WENV180177680
OAWF01000385
200276
Actinomycetota
CTT
Lys
>WENV180177764
OAWF01000617
200276
Actinomycetota
CTT
Lys
>WENV180177552
OAWF01000140
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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