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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180178250
OAWH01000160
5699
Gammaproteobacteria
GCT
Ser
>WENV180178160
OAWH01000002
404084
Gammaproteobacteria
CTG
Gln
>WENV180178316
OAWH01002405
290507
Gammaproteobacteria
TGC
Ala
>WENV180178285
OAWH01000664
99921
Gammaproteobacteria
GAG
Leu
>WENV180178242
OAWH01000129
482476
Gammaproteobacteria
CCA
Trp
>WENV180178208
OAWH01000039
401199
Gammaproteobacteria
TCC
Gly
>WENV180178330
OAWH01004232
285918
Gammaproteobacteria
GTG
His
>WENV180178181
OAWH01000008
285918
Gammaproteobacteria
GTG
His
>WENV180178288
OAWH01000952
118104
Gammaproteobacteria
TAG
Leu
>WENV180178182
OAWH01000008
74049
Gammaproteobacteria
CAG
Leu
>WENV180178180
OAWH01000008
179440
Gammaproteobacteria
CCG
Arg
>WENV180178252
OAWH01000160
184275
Gammaproteobacteria
ACG
Arg
>WENV180178363
OAWH01012405
286016
Gammaproteobacteria
TTT
Lys
>WENV180178190
OAWH01000014
286016
Gammaproteobacteria
TTT
Lys
>WENV180178189
OAWH01000013
286016
Gammaproteobacteria
TTT
Lys
>WENV180178163
OAWH01000002
286016
Gammaproteobacteria
TTT
Lys
>WENV180178202
OAWH01000030
282952
Gammaproteobacteria
TCT
Arg
>WENV180178289
OAWH01000952
401175
Gammaproteobacteria
TTG
Gln
>WENV180178290
OAWH01000952
401175
Gammaproteobacteria
TTG
Gln
>WENV180178277
OAWH01000352
4023
Gammaproteobacteria
>WENV180178254
OAWH01000195
282776
Gammaproteobacteria
GAA
Phe
>WENV180178339
OAWH01005610
282776
Gammaproteobacteria
GAA
Phe
>WENV180178193
OAWH01000020
73103
Gammaproteobacteria
TAA
Leu
>WENV180178271
OAWH01000214
73103
Gammaproteobacteria
TAA
Leu
>WENV180178360
OAWH01012330
73129
Gammaproteobacteria
TAA
Leu
>WENV180178284
OAWH01000649
291401
Gammaproteobacteria
TGC
Ala
>WENV180178156
OAWH01000002
119263
Gammaproteobacteria
TAG
Leu
>WENV180178276
OAWH01000329
399376
Gammaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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