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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180185701
OAWU01000052
117741
Bacteroidota
TAG
Leu
>WENV180186070
OAWU01001443
398829
Bacteroidota
CCT
Arg
>WENV180186307
OAWU01019107
175838
Bacteroidota
GTT
Asn
>WENV180185697
OAWU01000050
404226
Bacteroidota
CCT
Arg
>WENV180185890
OAWU01000346
404226
Bacteroidota
CCT
Arg
>WENV180186176
OAWU01003359
175904
Bacteroidota
CGG
Pro
>WENV180186134
OAWU01002308
280553
Bacteroidota
TTT
Lys
>WENV180185808
OAWU01000183
280553
Bacteroidota
TTT
Lys
>WENV180185935
OAWU01000509
280557
Bacteroidota
CAT
Met
>WENV180185933
OAWU01000490
20492
Bacteroidota
GGA
Ser
>WENV180185656
OAWU01000020
20206
Bacteroidota
GGA
Ser
>WENV180185889
OAWU01000346
398871
Bacteroidota
TTC
Glu
>WENV180185747
OAWU01000108
201819
Bacteroidota
CAT
Met
>WENV180186147
OAWU01002483
175906
Bacteroidota
GTG
His
>WENV180185686
OAWU01000041
175903
Bacteroidota
GTG
His
>WENV180185696
OAWU01000049
351598
Bacteroidota
CGG
Pro
>WENV180185815
OAWU01000212
351598
Bacteroidota
CGG
Pro
>WENV180185965
OAWU01000631
351598
Bacteroidota
CGG
Pro
>WENV180185997
OAWU01000873
118089
Bacteroidota
TAG
Leu
>WENV180186177
OAWU01003359
280530
Bacteroidota
CCA
Trp
>WENV180185959
OAWU01000619
203954
Bacteroidota
GTC
Asp
>WENV180186132
OAWU01002285
178907
Bacteroidota
TCT
Arg
>WENV180186157
OAWU01002912
20449
Bacteroidota
GGA
Ser
>WENV180185641
OAWU01000005
56072
Bacteroidota
TAA
Leu
>WENV180185632
OAWU01000002
175902
Bacteroidota
GGC
Ala
>WENV180186011
OAWU01000947
398860
Bacteroidota
CTC
Glu
>WENV180185638
OAWU01000004
480404
Bacteroidota
TTG
Gln
>WENV180185712
OAWU01000064
280451
Bacteroidota
CGT
Thr
>WENV180186047
OAWU01001189
99847
Bacteroidota
GTA
Tyr
>WENV180185953
OAWU01000600
99847
Bacteroidota
GTA
Tyr
>WENV180185652
OAWU01000018
99847
Bacteroidota
GTA
Tyr
>WENV180186171
OAWU01003169
399200
Bacteroidota
CAT
Met
>WENV180185655
OAWU01000020
488746
Bacteroidota
CTG
Gln
>WENV180186119
OAWU01002062
280478
Bacteroidota
GCC
Gly
>WENV180185961
OAWU01000624
27524
Bacteroidota
GGA
Ser
>WENV180186116
OAWU01001960
73011
Bacteroidota
CAA
Leu
>WENV180185642
OAWU01000006
398828
Bacteroidota
CCG
Arg
>WENV180186138
OAWU01002361
74084
Bacteroidota
CAG
Leu
>WENV180185916
OAWU01000446
159415
Bacteroidota
TAC
Val
>WENV180186068
OAWU01001417
480325
Bacteroidota
CTG
Gln
>WENV180185950
OAWU01000578
140771
Bacteroidota
>WENV180185872
OAWU01000320
176192
Bacteroidota
TCT
Arg
>WENV180185685
OAWU01000041
69204
Bacteroidota
TGA
Ser
>WENV180185822
OAWU01000215
69204
Bacteroidota
TGA
Ser
>WENV180186063
OAWU01001328
69204
Bacteroidota
TGA
Ser
>WENV180186305
OAWU01019034
69204
Bacteroidota
TGA
Ser
>WENV180185679
OAWU01000035
280446
Bacteroidota
TTT
Lys
>WENV180185644
OAWU01000009
280446
Bacteroidota
TTT
Lys
>WENV180185805
OAWU01000174
484496
Bacteroidota
TTG
Gln
>WENV180185810
OAWU01000189
27502
Bacteroidota
GGA
Ser
>WENV180185862
OAWU01000300
27502
Bacteroidota
GGA
Ser
>WENV180186135
OAWU01002321
285750
Bacteroidota
CCC
Gly
>WENV180186019
OAWU01000971
365112
Bacteroidota
TTT
Lys
>WENV180185879
OAWU01000340
365112
Bacteroidota
TTT
Lys
>WENV180185837
OAWU01000251
365112
Bacteroidota
TTT
Lys
>WENV180185977
OAWU01000700
398836
Bacteroidota
GCA
Cys
>WENV180186097
OAWU01001708
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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