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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180188083
OAWW01004224
148006
Verrucomicrobiota
CAA
Leu
>WENV180187961
OAWW01002085
293105
Verrucomicrobiota
CAT
Met
>WENV180188334
OAWW01037803
405901
Verrucomicrobiota
GCC
Gly
>WENV180188054
OAWW01003685
483642
Verrucomicrobiota
CCC
Gly
>WENV180187874
OAWW01001290
229220
Verrucomicrobiota
CAT
Met
>WENV180187996
OAWW01002542
293079
Verrucomicrobiota
CGC
Ala
>WENV180188041
OAWW01003330
120352
Verrucomicrobiota
TAG
Leu
>WENV180188053
OAWW01003685
489412
Verrucomicrobiota
TCC
Gly
>WENV180188128
OAWW01005559
293069
Verrucomicrobiota
CTT
Lys
>WENV180188211
OAWW01011355
406336
Verrucomicrobiota
CCT
Arg
>WENV180188152
OAWW01007137
406369
Verrucomicrobiota
CCG
Arg
>WENV180187881
OAWW01001337
405940
Verrucomicrobiota
GGT
Thr
>WENV180188077
OAWW01004021
187556
Verrucomicrobiota
GGG
Pro
>WENV180187905
OAWW01001586
406037
Verrucomicrobiota
GTG
His
>WENV180188187
OAWW01009163
406360
Verrucomicrobiota
GAC
Val
>WENV180187854
OAWW01001127
187548
Verrucomicrobiota
TCT
Arg
>WENV180188255
OAWW01016860
406040
Verrucomicrobiota
CGT
Thr
>WENV180188088
OAWW01004270
57652
Verrucomicrobiota
TGA
Ser
>WENV180188024
OAWW01002898
406368
Verrucomicrobiota
TTG
Gln
>WENV180188072
OAWW01003871
101461
Verrucomicrobiota
GTA
Tyr
>WENV180187811
OAWW01000913
293095
Verrucomicrobiota
TTT
Lys
>WENV180187969
OAWW01002181
187561
Verrucomicrobiota
CGG
Pro
>WENV180188079
OAWW01004075
406342
Verrucomicrobiota
CAT
Met
>WENV180188028
OAWW01003008
406351
Verrucomicrobiota
GTT
Asn
>WENV180188241
OAWW01014910
303305
Verrucomicrobiota
GGC
Ala
>WENV180187959
OAWW01002079
8938
Verrucomicrobiota
GCT
Ser
>WENV180188102
OAWW01004532
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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