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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180191878
OAXJ01000818
179231
Actinomycetota
TAC
Val
>WENV180191810
OAXJ01000611
176499
Actinomycetota
CAT
Met
>WENV180192300
OAXJ01005469
175907
Actinomycetota
TAC
Val
>WENV180192063
OAXJ01001803
280498
Actinomycetota
GTT
Asn
>WENV180192118
OAXJ01002284
280498
Actinomycetota
GTT
Asn
>WENV180192178
OAXJ01003359
295964
Actinomycetota
GTT
Asn
>WENV180191962
OAXJ01001139
459899
Actinomycetota
TTC
Glu
>WENV180192099
OAXJ01002115
56083
Actinomycetota
CGA
Ser
>WENV180191823
OAXJ01000650
140768
Actinomycetota
TAG
Leu
>WENV180192169
OAXJ01003044
176075
Actinomycetota
TCT
Arg
>WENV180192326
OAXJ01006196
175848
Actinomycetota
TGG
Pro
>WENV180192260
OAXJ01004629
59689
Actinomycetota
GGA
Ser
>WENV180192042
OAXJ01001663
175837
Actinomycetota
ACG
Arg
>WENV180192043
OAXJ01001663
175837
Actinomycetota
ACG
Arg
>WENV180192398
OAXJ01008449
175837
Actinomycetota
ACG
Arg
>WENV180192399
OAXJ01008449
175837
Actinomycetota
ACG
Arg
>WENV180192256
OAXJ01004576
29393
Actinomycetota
GCT
Ser
>WENV180192242
OAXJ01004327
280549
Actinomycetota
CAC
Val
>WENV180192262
OAXJ01004646
280702
Actinomycetota
GGC
Ala
>WENV180192241
OAXJ01004327
434162
Actinomycetota
GAC
Val
>WENV180192144
OAXJ01002718
176077
Actinomycetota
CAT
Met
>WENV180192038
OAXJ01001609
176638
Actinomycetota
GGG
Pro
>WENV180192193
OAXJ01003579
280524
Actinomycetota
TGC
Ala
>WENV180192311
OAXJ01005668
398948
Actinomycetota
TTC
Glu
>WENV180192214
OAXJ01003888
150272
Actinomycetota
TAA
Leu
>WENV180192206
OAXJ01003742
117777
Actinomycetota
>WENV180192194
OAXJ01003579
280523
Actinomycetota
GGC
Ala
>WENV180192145
OAXJ01002731
280523
Actinomycetota
GGC
Ala
>WENV180192207
OAXJ01003742
175949
Actinomycetota
CAT
Met
>WENV180192157
OAXJ01002895
191955
Actinomycetota
TGT
Thr
>WENV180191747
OAXJ01000485
175841
Actinomycetota
TAT
Ile
>WENV180192221
OAXJ01004018
280544
Actinomycetota
GTG
His
>WENV180192201
OAXJ01003685
280496
Actinomycetota
CGT
Thr
>WENV180191963
OAXJ01001139
175872
Actinomycetota
GTC
Asp
>WENV180192089
OAXJ01001982
280703
Actinomycetota
CCT
Arg
>WENV180191808
OAXJ01000611
20205
Actinomycetota
GCT
Ser
>WENV180192558
OAXJ01023354
323758
Actinomycetota
CGT
Thr
>WENV180191946
OAXJ01001070
480329
Actinomycetota
CCC
Gly
>WENV180191894
OAXJ01000868
175882
Actinomycetota
TGG
Pro
>WENV180191748
OAXJ01000486
20209
Actinomycetota
GAG
Leu
>WENV180192113
OAXJ01002238
222475
Actinomycetota
CTT
Lys
>WENV180191989
OAXJ01001340
480319
Actinomycetota
TTG
Gln
>WENV180192069
OAXJ01001838
280489
Actinomycetota
CTC
Glu
>WENV180191803
OAXJ01000605
280499
Actinomycetota
CCT
Arg
>WENV180192070
OAXJ01001838
398853
Actinomycetota
CTG
Gln
>WENV180192405
OAXJ01008908
175843
Actinomycetota
CAA
Leu
>WENV180191893
OAXJ01000868
175843
Actinomycetota
CAA
Leu
>WENV180192163
OAXJ01002978
203883
Actinomycetota
TCT
Arg
>WENV180192180
OAXJ01003394
56075
Actinomycetota
TGA
Ser
>WENV180192053
OAXJ01001754
46642
Actinomycetota
CGA
Ser
>WENV180191947
OAXJ01001070
104211
Actinomycetota
CAG
Leu
>WENV180192386
OAXJ01007908
104211
Actinomycetota
CAG
Leu
>WENV180191809
OAXJ01000611
117903
Actinomycetota
GTA
Tyr
>WENV180191980
OAXJ01001266
56071
Actinomycetota
TGA
Ser
>WENV180192126
OAXJ01002429
147796
Actinomycetota
TAA
Leu
>WENV180191822
OAXJ01000650
280470
Actinomycetota
CGT
Thr
>WENV180192330
OAXJ01006284
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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