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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180194872
OAZY01000257
172207
Bacteroidota
GGG
Pro
>WENV180194862
OAZY01000232
117741
Bacteroidota
TAG
Leu
>WENV180194718
OAZY01000067
398829
Bacteroidota
CCT
Arg
>WENV180194752
OAZY01000101
398829
Bacteroidota
CCT
Arg
>WENV180194962
OAZY01000514
175838
Bacteroidota
GTT
Asn
>WENV180194963
OAZY01000514
175838
Bacteroidota
GTT
Asn
>WENV180194886
OAZY01000300
280557
Bacteroidota
CAT
Met
>WENV180194812
OAZY01000161
20492
Bacteroidota
GGA
Ser
>WENV180195096
OAZY01001354
20206
Bacteroidota
GGA
Ser
>WENV180195287
OAZY01009513
483416
Bacteroidota
CTG
Gln
>WENV180195387
OAZY01040621
201819
Bacteroidota
CAT
Met
>WENV180194713
OAZY01000061
175903
Bacteroidota
GTG
His
>WENV180194746
OAZY01000096
351598
Bacteroidota
CGG
Pro
>WENV180194731
OAZY01000081
351598
Bacteroidota
CGG
Pro
>WENV180194737
OAZY01000088
351598
Bacteroidota
CGG
Pro
>WENV180194960
OAZY01000514
398872
Bacteroidota
GGT
Thr
>WENV180194903
OAZY01000349
398872
Bacteroidota
GGT
Thr
>WENV180195177
OAZY01002607
405877
Bacteroidota
GGT
Thr
>WENV180195300
OAZY01010278
21127
Bacteroidota
GGA
Ser
>WENV180194751
OAZY01000101
56072
Bacteroidota
TAA
Leu
>WENV180194690
OAZY01000047
175902
Bacteroidota
GGC
Ala
>WENV180194758
OAZY01000110
398860
Bacteroidota
CTC
Glu
>WENV180194974
OAZY01000538
480404
Bacteroidota
TTG
Gln
>WENV180195064
OAZY01001018
280451
Bacteroidota
CGT
Thr
>WENV180194852
OAZY01000203
99847
Bacteroidota
GTA
Tyr
>WENV180194924
OAZY01000426
99847
Bacteroidota
GTA
Tyr
>WENV180194959
OAZY01000514
99847
Bacteroidota
GTA
Tyr
>WENV180195306
OAZY01012440
186874
Bacteroidota
CAT
Met
>WENV180194992
OAZY01000638
488746
Bacteroidota
CTG
Gln
>WENV180194646
OAZY01000034
27524
Bacteroidota
GGA
Ser
>WENV180194775
OAZY01000124
398828
Bacteroidota
CCG
Arg
>WENV180194871
OAZY01000251
159415
Bacteroidota
TAC
Val
>WENV180194870
OAZY01000251
159415
Bacteroidota
TAC
Val
>WENV180194843
OAZY01000196
176192
Bacteroidota
TCT
Arg
>WENV180195138
OAZY01001851
69204
Bacteroidota
TGA
Ser
>WENV180194768
OAZY01000116
69204
Bacteroidota
TGA
Ser
>WENV180194712
OAZY01000061
69204
Bacteroidota
TGA
Ser
>WENV180194645
OAZY01000034
69204
Bacteroidota
TGA
Ser
>WENV180194912
OAZY01000385
280446
Bacteroidota
TTT
Lys
>WENV180195078
OAZY01001175
484496
Bacteroidota
TTG
Gln
>WENV180194747
OAZY01000099
27502
Bacteroidota
GGA
Ser
>WENV180194732
OAZY01000084
27502
Bacteroidota
GGA
Ser
>WENV180194720
OAZY01000069
365112
Bacteroidota
TTT
Lys
>WENV180194827
OAZY01000176
365112
Bacteroidota
TTT
Lys
>WENV180194909
OAZY01000380
365112
Bacteroidota
TTT
Lys
>WENV180194918
OAZY01000399
365112
Bacteroidota
TTT
Lys
>WENV180194971
OAZY01000523
398836
Bacteroidota
GCA
Cys
>WENV180194556
OAZY01000004
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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