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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
144 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180204709
OBAH01001204
99852
Bacillota
GTA
Tyr
>WENV180205919
OBAH01209627
416763
Bacillota
CTC
Glu
>WENV180205369
OBAH01019013
280500
Bacillota
TGC
Ala
>WENV180205417
OBAH01022772
280500
Bacillota
TGC
Ala
>WENV180205713
OBAH01078164
405363
Bacillota
GCA
Cys
>WENV180205761
OBAH01094373
280428
Bacillota
GAA
Phe
>WENV180205823
OBAH01123174
280428
Bacillota
GAA
Phe
>WENV180205769
OBAH01096388
291579
Bacillota
GAA
Phe
>WENV180205137
OBAH01007149
291579
Bacillota
GAA
Phe
>WENV180205003
OBAH01003650
291579
Bacillota
GAA
Phe
>WENV180204793
OBAH01001649
291579
Bacillota
GAA
Phe
>WENV180205627
OBAH01051931
480359
Bacillota
TCC
Gly
>WENV180204091
OBAH01000011
184114
Bacillota
GTG
His
>WENV180205410
OBAH01022092
280466
Bacillota
TAC
Val
>WENV180205120
OBAH01006496
280492
Bacillota
CTT
Lys
>WENV180204927
OBAH01002748
280492
Bacillota
CTT
Lys
>WENV180205877
OBAH01165579
418726
Bacillota
TGT
Thr
>WENV180204887
OBAH01002403
175842
Bacillota
CAC
Val
>WENV180205540
OBAH01037273
184497
Bacillota
GGG
Pro
>WENV180205884
OBAH01180004
398915
Bacillota
TTC
Glu
>WENV180205415
OBAH01022563
179563
Bacillota
GAT
Ile
>WENV180205803
OBAH01114259
179563
Bacillota
GAT
Ile
>WENV180204914
OBAH01002634
179176
Bacillota
ACG
Arg
>WENV180205802
OBAH01114259
295166
Bacillota
TGC
Ala
>WENV180205139
OBAH01007198
190476
Bacillota
CAT
Met
>WENV180204582
OBAH01000739
190476
Bacillota
CAT
Met
>WENV180205828
OBAH01125827
176014
Bacillota
TCT
Arg
>WENV180204638
OBAH01000898
73664
Bacillota
CAG
Leu
>WENV180204241
OBAH01000107
73664
Bacillota
CAG
Leu
>WENV180205308
OBAH01014704
280447
Bacillota
GAC
Val
>WENV180205174
OBAH01008493
280447
Bacillota
GAC
Val
>WENV180205153
OBAH01007673
280447
Bacillota
GAC
Val
>WENV180205052
OBAH01004572
5692
Bacillota
GCT
Ser
>WENV180205760
OBAH01094372
175825
Bacillota
GAT
Ile
>WENV180204735
OBAH01001316
73009
Bacillota
CAG
Leu
>WENV180205288
OBAH01013268
73009
Bacillota
CAG
Leu
>WENV180205400
OBAH01021432
73009
Bacillota
CAG
Leu
>WENV180205538
OBAH01037127
73009
Bacillota
CAG
Leu
>WENV180205773
OBAH01099046
73009
Bacillota
CAG
Leu
>WENV180205068
OBAH01004938
481217
Bacillota
GCA
Cys
>WENV180204657
OBAH01000956
481217
Bacillota
GCA
Cys
>WENV180204656
OBAH01000956
481217
Bacillota
GCA
Cys
>WENV180205667
OBAH01060593
280646
Bacillota
TGC
Ala
>WENV180205851
OBAH01140287
189473
Bacillota
GAT
Ile
>WENV180204606
OBAH01000771
291581
Bacillota
CGG
Pro
>WENV180204877
OBAH01002311
175859
Bacillota
TCT
Arg
>WENV180205759
OBAH01094372
280436
Bacillota
TGC
Ala
>WENV180205581
OBAH01043779
175847
Bacillota
GTC
Asp
>WENV180204838
OBAH01001909
21311
Bacillota
GCT
Ser
>WENV180205929
OBAH01210578
175831
Bacillota
ACG
Arg
>WENV180205768
OBAH01096388
187589
Bacillota
CAT
Met
>WENV180205602
OBAH01046686
187589
Bacillota
CAT
Met
>WENV180205136
OBAH01007149
187589
Bacillota
CAT
Met
>WENV180204930
OBAH01002794
284627
Bacillota
GAA
Phe
>WENV180204284
OBAH01000155
284627
Bacillota
GAA
Phe
>WENV180205836
OBAH01132387
195133
Bacillota
GTC
Asp
>WENV180205087
OBAH01005445
294020
Bacillota
TAC
Val
>WENV180205704
OBAH01070943
294020
Bacillota
TAC
Val
>WENV180205844
OBAH01135605
294020
Bacillota
TAC
Val
>WENV180205368
OBAH01019013
175916
Bacillota
GAT
Ile
>WENV180205478
OBAH01028396
480322
Bacillota
CTG
Gln
>WENV180205199
OBAH01009645
480322
Bacillota
CTG
Gln
>WENV180204605
OBAH01000771
480322
Bacillota
CTG
Gln
>WENV180205798
OBAH01112003
187364
Bacillota
CAT
Met
>WENV180205617
OBAH01049269
401685
Bacillota
TTG
Gln
>WENV180204519
OBAH01000591
175868
Bacillota
GTT
Asn
>WENV180204775
OBAH01001520
175868
Bacillota
GTT
Asn
>WENV180205600
OBAH01046619
175868
Bacillota
GTT
Asn
>WENV180205869
OBAH01152758
120584
Bacillota
GTA
Tyr
>WENV180204517
OBAH01000591
322848
Bacillota
CTT
Lys
>WENV180204518
OBAH01000591
398854
Bacillota
CTC
Glu
>WENV180205599
OBAH01046619
398854
Bacillota
CTC
Glu
>WENV180205183
OBAH01008792
480324
Bacillota
TTG
Gln
>WENV180205719
OBAH01081199
175899
Bacillota
GTC
Asp
>WENV180204957
OBAH01003120
303718
Bacillota
TGT
Thr
>WENV180204439
OBAH01000408
303718
Bacillota
TGT
Thr
>WENV180204158
OBAH01000046
303718
Bacillota
TGT
Thr
>WENV180205573
OBAH01041590
73638
Bacillota
AAG
Leu
>WENV180204482
OBAH01000510
56079
Bacillota
AAG
Leu
>WENV180205500
OBAH01030139
398857
Bacillota
TTC
Glu
>WENV180204908
OBAH01002540
204381
Bacillota
GAT
Ile
>WENV180204905
OBAH01002527
204381
Bacillota
GAT
Ile
>WENV180205357
OBAH01018578
117745
Bacillota
GTA
Tyr
>WENV180204870
OBAH01002236
117745
Bacillota
GTA
Tyr
>WENV180205937
OBAH01212869
280444
Bacillota
GGT
Thr
>WENV180205306
OBAH01014415
280444
Bacillota
GGT
Thr
>WENV180205082
OBAH01005140
280444
Bacillota
GGT
Thr
>WENV180204538
OBAH01000628
317482
Bacillota
TAC
Val
>WENV180205648
OBAH01056035
291597
Bacillota
TGC
Ala
>WENV180205398
OBAH01021362
291597
Bacillota
TGC
Ala
>WENV180204771
OBAH01001473
46643
Bacillota
TGA
Ser
>WENV180205762
OBAH01094373
321753
Bacillota
GCC
Gly
>WENV180205735
OBAH01086688
321753
Bacillota
GCC
Gly
>WENV180205712
OBAH01078164
321753
Bacillota
GCC
Gly
>WENV180205562
OBAH01039977
321753
Bacillota
GCC
Gly
>WENV180205409
OBAH01022092
321753
Bacillota
GCC
Gly
>WENV180204557
OBAH01000649
179755
Bacillota
CCG
Arg
>WENV180205252
OBAH01011642
58120
Bacillota
AAG
Leu
>WENV180204986
OBAH01003458
58120
Bacillota
AAG
Leu
>WENV180205918
OBAH01209596
198522
Bacillota
GAT
Ile
>WENV180205367
OBAH01018937
46835
Bacillota
TAA
Leu
>WENV180205214
OBAH01010245
46835
Bacillota
TAA
Leu
>WENV180205217
OBAH01010335
330413
Bacillota
CTT
Lys
>WENV180205140
OBAH01007198
398832
Bacillota
TTC
Glu
>WENV180204583
OBAH01000739
398832
Bacillota
TTC
Glu
>WENV180204256
OBAH01000125
398832
Bacillota
TTC
Glu
>WENV180204384
OBAH01000293
118669
Bacillota
GTA
Tyr
>WENV180204282
OBAH01000155
118669
Bacillota
GTA
Tyr
>WENV180205611
OBAH01048254
175915
Bacillota
GTC
Asp
>WENV180204619
OBAH01000817
280476
Bacillota
TTT
Lys
>WENV180204892
OBAH01002417
280476
Bacillota
TTT
Lys
>WENV180205138
OBAH01007149
280476
Bacillota
TTT
Lys
>WENV180205942
OBAH01213081
280476
Bacillota
TTT
Lys
>WENV180205359
OBAH01018578
280462
Bacillota
GAA
Phe
>WENV180204615
OBAH01000811
280462
Bacillota
GAA
Phe
>WENV180205676
OBAH01062684
398852
Bacillota
CTC
Glu
>WENV180204808
OBAH01001721
398852
Bacillota
CTC
Glu
>WENV180204807
OBAH01001721
398852
Bacillota
CTC
Glu
>WENV180204703
OBAH01001179
398852
Bacillota
CTC
Glu
>WENV180204537
OBAH01000627
398852
Bacillota
CTC
Glu
>WENV180204470
OBAH01000497
398852
Bacillota
CTC
Glu
>WENV180204225
OBAH01000087
398852
Bacillota
CTC
Glu
>WENV180205618
OBAH01049269
309916
Bacillota
TTT
Lys
>WENV180204130
OBAH01000032
280483
Bacillota
GAA
Phe
>WENV180204375
OBAH01000274
285601
Bacillota
TTC
Glu
>WENV180204374
OBAH01000274
285601
Bacillota
TTC
Glu
>WENV180205658
OBAH01058738
175857
Bacillota
GTG
His
>WENV180205616
OBAH01049269
175857
Bacillota
GTG
His
>WENV180204922
OBAH01002684
175857
Bacillota
GTG
His
>WENV180204831
OBAH01001888
175857
Bacillota
GTG
His
>WENV180204131
OBAH01000032
285756
Bacillota
GCC
Gly
>WENV180204708
OBAH01001204
398833
Bacillota
TGT
Thr
>WENV180205305
OBAH01014415
175849
Bacillota
GTC
Asp
>WENV180205411
OBAH01022092
175849
Bacillota
GTC
Asp
>WENV180205736
OBAH01086688
175849
Bacillota
GTC
Asp
>WENV180205763
OBAH01094373
175849
Bacillota
GTC
Asp
>WENV180205790
OBAH01104904
175849
Bacillota
GTC
Asp
>WENV180205208
OBAH01010106
317820
Bacillota
TAC
Val
>WENV180205360
OBAH01018578
280463
Bacillota
TTT
Lys
>WENV180204833
OBAH01001888
280463
Bacillota
TTT
Lys
>WENV180204889
OBAH01002417
179166
Bacillota
TCT
Arg
>WENV180205731
OBAH01084040
280486
Bacillota
TGC
Ala
>WENV180205051
OBAH01004572
56074
Bacillota
TGA
Ser
>WENV180205101
OBAH01005976
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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