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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
88 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180205098
OBAH01005755
117741
Bacteroidota
TAG
Leu
>WENV180205504
OBAH01030306
398829
Bacteroidota
CCT
Arg
>WENV180205222
OBAH01010529
175838
Bacteroidota
GTT
Asn
>WENV180205223
OBAH01010529
175838
Bacteroidota
GTT
Asn
>WENV180205694
OBAH01069291
404226
Bacteroidota
CCT
Arg
>WENV180204916
OBAH01002636
175904
Bacteroidota
CGG
Pro
>WENV180205914
OBAH01209460
400161
Bacteroidota
GGT
Thr
>WENV180204170
OBAH01000055
289031
Bacteroidota
CAT
Met
>WENV180204602
OBAH01000769
156422
Bacteroidota
TAC
Val
>WENV180204574
OBAH01000700
156422
Bacteroidota
TAC
Val
>WENV180204179
OBAH01000061
282852
Bacteroidota
TTT
Lys
>WENV180205158
OBAH01007932
280557
Bacteroidota
CAT
Met
>WENV180205457
OBAH01026175
20206
Bacteroidota
GGA
Ser
>WENV180204929
OBAH01002771
483416
Bacteroidota
CTG
Gln
>WENV180205507
OBAH01031217
282712
Bacteroidota
TTT
Lys
>WENV180205572
OBAH01041556
398871
Bacteroidota
TTC
Glu
>WENV180204173
OBAH01000057
201819
Bacteroidota
CAT
Met
>WENV180204112
OBAH01000026
201819
Bacteroidota
CAT
Met
>WENV180205061
OBAH01004699
118221
Bacteroidota
CAA
Leu
>WENV180205016
OBAH01003757
118221
Bacteroidota
CAA
Leu
>WENV180204581
OBAH01000733
118221
Bacteroidota
CAA
Leu
>WENV180205450
OBAH01025219
175906
Bacteroidota
GTG
His
>WENV180205479
OBAH01028400
175903
Bacteroidota
GTG
His
>WENV180205505
OBAH01030881
118089
Bacteroidota
TAG
Leu
>WENV180205412
OBAH01022134
280530
Bacteroidota
CCA
Trp
>WENV180204794
OBAH01001652
56385
Bacteroidota
TGA
Ser
>WENV180204229
OBAH01000091
56385
Bacteroidota
TGA
Ser
>WENV180204622
OBAH01000829
312035
Bacteroidota
CCA
Trp
>WENV180205219
OBAH01010447
56072
Bacteroidota
TAA
Leu
>WENV180205706
OBAH01071751
57807
Bacteroidota
TGA
Ser
>WENV180204847
OBAH01001980
175944
Bacteroidota
CAT
Met
>WENV180205134
OBAH01007026
175902
Bacteroidota
GGC
Ala
>WENV180205547
OBAH01037961
398860
Bacteroidota
CTC
Glu
>WENV180205565
OBAH01040172
480404
Bacteroidota
TTG
Gln
>WENV180205187
OBAH01008920
280451
Bacteroidota
CGT
Thr
>WENV180204564
OBAH01000661
418894
Bacteroidota
TTC
Glu
>WENV180204563
OBAH01000661
418894
Bacteroidota
TTC
Glu
>WENV180205786
OBAH01101575
99847
Bacteroidota
GTA
Tyr
>WENV180205283
OBAH01013058
399200
Bacteroidota
CAT
Met
>WENV180205021
OBAH01003805
404109
Bacteroidota
CTC
Glu
>WENV180205020
OBAH01003805
404109
Bacteroidota
CTC
Glu
>WENV180204723
OBAH01001276
404109
Bacteroidota
CTC
Glu
>WENV180204722
OBAH01001276
404109
Bacteroidota
CTC
Glu
>WENV180204683
OBAH01001084
404109
Bacteroidota
CTC
Glu
>WENV180204682
OBAH01001084
404109
Bacteroidota
CTC
Glu
>WENV180204597
OBAH01000760
404109
Bacteroidota
CTC
Glu
>WENV180204596
OBAH01000760
404109
Bacteroidota
CTC
Glu
>WENV180204222
OBAH01000086
404109
Bacteroidota
CTC
Glu
>WENV180204221
OBAH01000086
404109
Bacteroidota
CTC
Glu
>WENV180204313
OBAH01000184
186874
Bacteroidota
CAT
Met
>WENV180205169
OBAH01008378
46648
Bacteroidota
TAA
Leu
>WENV180204760
OBAH01001408
46648
Bacteroidota
TAA
Leu
>WENV180204394
OBAH01000312
46648
Bacteroidota
TAA
Leu
>WENV180204356
OBAH01000253
46648
Bacteroidota
TAA
Leu
>WENV180205429
OBAH01023886
488746
Bacteroidota
CTG
Gln
>WENV180204988
OBAH01003465
118432
Bacteroidota
CAG
Leu
>WENV180204307
OBAH01000179
118432
Bacteroidota
CAG
Leu
>WENV180205640
OBAH01054457
280478
Bacteroidota
GCC
Gly
>WENV180205231
OBAH01011050
186108
Bacteroidota
GTT
Asn
>WENV180205202
OBAH01009716
175844
Bacteroidota
GGC
Ala
>WENV180205393
OBAH01020981
73011
Bacteroidota
CAA
Leu
>WENV180205709
OBAH01073521
187814
Bacteroidota
GTC
Asp
>WENV180204972
OBAH01003205
187814
Bacteroidota
GTC
Asp
>WENV180204801
OBAH01001665
187814
Bacteroidota
GTC
Asp
>WENV180204650
OBAH01000923
187814
Bacteroidota
GTC
Asp
>WENV180204649
OBAH01000923
187814
Bacteroidota
GTC
Asp
>WENV180204648
OBAH01000923
187814
Bacteroidota
GTC
Asp
>WENV180204763
OBAH01001419
178134
Bacteroidota
TGG
Pro
>WENV180204762
OBAH01001419
178134
Bacteroidota
TGG
Pro
>WENV180205111
OBAH01006303
158068
Bacteroidota
GGG
Pro
>WENV180205462
OBAH01026597
186142
Bacteroidota
GAT
Ile
>WENV180205317
OBAH01015648
398828
Bacteroidota
CCG
Arg
>WENV180204074
OBAH01000006
191205
Bacteroidota
TGG
Pro
>WENV180204177
OBAH01000060
191205
Bacteroidota
TGG
Pro
>WENV180204178
OBAH01000060
191205
Bacteroidota
TGG
Pro
>WENV180205194
OBAH01009295
74084
Bacteroidota
CAG
Leu
>WENV180205421
OBAH01023232
159415
Bacteroidota
TAC
Val
>WENV180205916
OBAH01209551
480325
Bacteroidota
CTG
Gln
>WENV180205337
OBAH01016977
176192
Bacteroidota
TCT
Arg
>WENV180204578
OBAH01000706
481328
Bacteroidota
TTG
Gln
>WENV180204337
OBAH01000224
481328
Bacteroidota
TTG
Gln
>WENV180204389
OBAH01000302
491385
Bacteroidota
TTG
Gln
>WENV180205741
OBAH01088269
400088
Bacteroidota
GGT
Thr
>WENV180205037
OBAH01004212
484496
Bacteroidota
TTG
Gln
>WENV180205272
OBAH01012435
285750
Bacteroidota
CCC
Gly
>WENV180205463
OBAH01026597
186143
Bacteroidota
TGC
Ala
>WENV180205009
OBAH01003708
398836
Bacteroidota
GCA
Cys
>WENV180205323
OBAH01015946
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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