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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180222161
OBBC01015758
343590
Bacillota
GCC
Gly
>WENV180222123
OBBC01010711
280500
Bacillota
TGC
Ala
>WENV180222262
OBBC01050906
280466
Bacillota
TAC
Val
>WENV180222209
OBBC01027571
82124
Bacillota
TAA
Leu
>WENV180222061
OBBC01001497
73664
Bacillota
CAG
Leu
>WENV180222214
OBBC01028183
175825
Bacillota
GAT
Ile
>WENV180222181
OBBC01021536
175847
Bacillota
GTC
Asp
>WENV180222275
OBBC01057961
175831
Bacillota
ACG
Arg
>WENV180222088
OBBC01004207
179810
Bacillota
TCT
Arg
>WENV180222129
OBBC01010725
284627
Bacillota
GAA
Phe
>WENV180222066
OBBC01001631
284627
Bacillota
GAA
Phe
>WENV180222115
OBBC01009923
323864
Bacillota
TGC
Ala
>WENV180222151
OBBC01012599
46655
Bacillota
TGA
Ser
>WENV180222064
OBBC01001631
118669
Bacillota
GTA
Tyr
>WENV180222258
OBBC01048102
309916
Bacillota
TTT
Lys
>WENV180222158
OBBC01015093
444984
Bacillota
GCC
Gly
>WENV180222089
OBBC01004207
175857
Bacillota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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