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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180223000
OBBF01002225
398829
Bacteroidota
CCT
Arg
>WENV180223023
OBBF01003626
175904
Bacteroidota
CGG
Pro
>WENV180222941
OBBF01000743
289031
Bacteroidota
CAT
Met
>WENV180223005
OBBF01002348
20206
Bacteroidota
GGA
Ser
>WENV180223070
OBBF01009334
282712
Bacteroidota
TTT
Lys
>WENV180223072
OBBF01010076
398871
Bacteroidota
TTC
Glu
>WENV180223125
OBBF01019823
175906
Bacteroidota
GTG
His
>WENV180223068
OBBF01009013
175903
Bacteroidota
GTG
His
>WENV180223093
OBBF01013760
351598
Bacteroidota
CGG
Pro
>WENV180222979
OBBF01001554
280530
Bacteroidota
CCA
Trp
>WENV180222988
OBBF01001805
20449
Bacteroidota
GGA
Ser
>WENV180223036
OBBF01004832
99847
Bacteroidota
GTA
Tyr
>WENV180223242
OBBF01075738
399200
Bacteroidota
CAT
Met
>WENV180223050
OBBF01006198
27524
Bacteroidota
GGA
Ser
>WENV180222914
OBBF01000292
280515
Bacteroidota
CCA
Trp
>WENV180222986
OBBF01001739
400088
Bacteroidota
GGT
Thr
>WENV180223074
OBBF01010782
27502
Bacteroidota
GGA
Ser
>WENV180223004
OBBF01002299
398836
Bacteroidota
GCA
Cys
>WENV180223130
OBBF01020739
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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