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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180240393
OBDC01037970
398829
Bacteroidota
CCT
Arg
>WENV180240325
OBDC01013896
289031
Bacteroidota
CAT
Met
>WENV180240355
OBDC01021627
398871
Bacteroidota
TTC
Glu
>WENV180240398
OBDC01044228
175906
Bacteroidota
GTG
His
>WENV180240317
OBDC01011735
351598
Bacteroidota
CGG
Pro
>WENV180240318
OBDC01012016
398872
Bacteroidota
GGT
Thr
>WENV180240217
OBDC01000255
99847
Bacteroidota
GTA
Tyr
>WENV180240256
OBDC01002404
399200
Bacteroidota
CAT
Met
>WENV180240366
OBDC01025521
280478
Bacteroidota
GCC
Gly
>WENV180240220
OBDC01000277
280515
Bacteroidota
CCA
Trp
>WENV180240367
OBDC01025521
74084
Bacteroidota
CAG
Leu
>WENV180240289
OBDC01005771
400088
Bacteroidota
GGT
Thr
>WENV180240372
OBDC01029140
69204
Bacteroidota
TGA
Ser
>WENV180240380
OBDC01030797
27502
Bacteroidota
GGA
Ser
>WENV180240373
OBDC01029140
27502
Bacteroidota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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