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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
95 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180289539
OBIU01000006
179231
Actinomycetota
TAC
Val
>WENV180289635
OBIU01000042
176499
Actinomycetota
CAT
Met
>WENV180289659
OBIU01000045
176499
Actinomycetota
CAT
Met
>WENV180290008
OBIU01001027
175883
Actinomycetota
GAT
Ile
>WENV180290010
OBIU01001027
175883
Actinomycetota
GAT
Ile
>WENV180290217
OBIU01004973
175883
Actinomycetota
GAT
Ile
>WENV180290219
OBIU01004973
175883
Actinomycetota
GAT
Ile
>WENV180290484
OBIU01025604
175907
Actinomycetota
TAC
Val
>WENV180289700
OBIU01000067
283311
Actinomycetota
CCT
Arg
>WENV180290550
OBIU01037910
280498
Actinomycetota
GTT
Asn
>WENV180289593
OBIU01000025
280498
Actinomycetota
GTT
Asn
>WENV180289583
OBIU01000021
280498
Actinomycetota
GTT
Asn
>WENV180290899
OBIU01154957
280503
Actinomycetota
CCT
Arg
>WENV180289928
OBIU01000502
280503
Actinomycetota
CCT
Arg
>WENV180289633
OBIU01000040
295964
Actinomycetota
GTT
Asn
>WENV180290148
OBIU01003466
56083
Actinomycetota
CGA
Ser
>WENV180289993
OBIU01000868
140768
Actinomycetota
TAG
Leu
>WENV180289612
OBIU01000033
56384
Actinomycetota
TGA
Ser
>WENV180290020
OBIU01001115
176075
Actinomycetota
TCT
Arg
>WENV180289819
OBIU01000229
176078
Actinomycetota
GGG
Pro
>WENV180289813
OBIU01000217
59689
Actinomycetota
GGA
Ser
>WENV180291006
OBIU01194411
175837
Actinomycetota
ACG
Arg
>WENV180289841
OBIU01000288
175837
Actinomycetota
ACG
Arg
>WENV180290227
OBIU01005017
186055
Actinomycetota
ACG
Arg
>WENV180289625
OBIU01000037
186055
Actinomycetota
ACG
Arg
>WENV180289624
OBIU01000037
186055
Actinomycetota
ACG
Arg
>WENV180289674
OBIU01000054
380862
Actinomycetota
CAC
Val
>WENV180289682
OBIU01000057
380862
Actinomycetota
CAC
Val
>WENV180289660
OBIU01000045
24925
Actinomycetota
GCT
Ser
>WENV180289882
OBIU01000360
349164
Actinomycetota
CTC
Glu
>WENV180289611
OBIU01000033
56383
Actinomycetota
CGA
Ser
>WENV180290939
OBIU01175076
280702
Actinomycetota
GGC
Ala
>WENV180290386
OBIU01015138
398843
Actinomycetota
GTT
Asn
>WENV180290073
OBIU01001876
398843
Actinomycetota
GTT
Asn
>WENV180290940
OBIU01175437
176077
Actinomycetota
CAT
Met
>WENV180289599
OBIU01000026
283312
Actinomycetota
GTG
His
>WENV180290153
OBIU01003555
241064
Actinomycetota
CTC
Glu
>WENV180290369
OBIU01014302
241064
Actinomycetota
CTC
Glu
>WENV180291007
OBIU01194490
241064
Actinomycetota
CTC
Glu
>WENV180289857
OBIU01000323
176638
Actinomycetota
GGG
Pro
>WENV180289761
OBIU01000121
280524
Actinomycetota
TGC
Ala
>WENV180290971
OBIU01191385
481719
Actinomycetota
GCA
Cys
>WENV180289817
OBIU01000226
283313
Actinomycetota
CCG
Arg
>WENV180289714
OBIU01000080
398948
Actinomycetota
TTC
Glu
>WENV180291010
OBIU01194587
291585
Actinomycetota
GCC
Gly
>WENV180290970
OBIU01191385
291585
Actinomycetota
GCC
Gly
>WENV180290240
OBIU01005317
291585
Actinomycetota
GCC
Gly
>WENV180289961
OBIU01000716
291585
Actinomycetota
GCC
Gly
>WENV180289658
OBIU01000045
117777
Actinomycetota
>WENV180289762
OBIU01000121
280523
Actinomycetota
GGC
Ala
>WENV180289675
OBIU01000054
280523
Actinomycetota
GGC
Ala
>WENV180289631
OBIU01000040
280523
Actinomycetota
GGC
Ala
>WENV180289592
OBIU01000025
280523
Actinomycetota
GGC
Ala
>WENV180289607
OBIU01000028
227544
Actinomycetota
TAC
Val
>WENV180289663
OBIU01000047
175841
Actinomycetota
TAT
Ile
>WENV180289758
OBIU01000116
20415
Actinomycetota
GAG
Leu
>WENV180290127
OBIU01002846
280536
Actinomycetota
CTT
Lys
>WENV180290362
OBIU01013816
280496
Actinomycetota
CGT
Thr
>WENV180289945
OBIU01000594
175872
Actinomycetota
GTC
Asp
>WENV180289662
OBIU01000047
175872
Actinomycetota
GTC
Asp
>WENV180290297
OBIU01008676
280703
Actinomycetota
CCT
Arg
>WENV180289677
OBIU01000054
140879
Actinomycetota
TAG
Leu
>WENV180289639
OBIU01000042
20205
Actinomycetota
GCT
Ser
>WENV180290147
OBIU01003428
175926
Actinomycetota
CAT
Met
>WENV180290134
OBIU01003015
175926
Actinomycetota
CAT
Met
>WENV180289699
OBIU01000066
178569
Actinomycetota
CAT
Met
>WENV180289608
OBIU01000029
280450
Actinomycetota
TTT
Lys
>WENV180289759
OBIU01000119
358727
Actinomycetota
CCG
Arg
>WENV180289741
OBIU01000094
480329
Actinomycetota
CCC
Gly
>WENV180289739
OBIU01000093
480329
Actinomycetota
CCC
Gly
>WENV180289786
OBIU01000162
483206
Actinomycetota
CTG
Gln
>WENV180290093
OBIU01002334
483206
Actinomycetota
CTG
Gln
>WENV180290114
OBIU01002653
483206
Actinomycetota
CTG
Gln
>WENV180290368
OBIU01014302
483206
Actinomycetota
CTG
Gln
>WENV180289973
OBIU01000742
175882
Actinomycetota
TGG
Pro
>WENV180289582
OBIU01000021
20209
Actinomycetota
GAG
Leu
>WENV180289740
OBIU01000094
99865
Actinomycetota
CAG
Leu
>WENV180289678
OBIU01000054
222475
Actinomycetota
CTT
Lys
>WENV180290304
OBIU01009058
222475
Actinomycetota
CTT
Lys
>WENV180289745
OBIU01000100
480319
Actinomycetota
TTG
Gln
>WENV180289540
OBIU01000006
280499
Actinomycetota
CCT
Arg
>WENV180289883
OBIU01000360
398853
Actinomycetota
CTG
Gln
>WENV180289952
OBIU01000640
175843
Actinomycetota
CAA
Leu
>WENV180289703
OBIU01000069
175843
Actinomycetota
CAA
Leu
>WENV180289572
OBIU01000017
203883
Actinomycetota
TCT
Arg
>WENV180290486
OBIU01026637
56075
Actinomycetota
TGA
Ser
>WENV180289638
OBIU01000042
46642
Actinomycetota
CGA
Ser
>WENV180289738
OBIU01000093
104211
Actinomycetota
CAG
Leu
>WENV180289634
OBIU01000042
117903
Actinomycetota
GTA
Tyr
>WENV180289636
OBIU01000042
56071
Actinomycetota
TGA
Ser
>WENV180289702
OBIU01000069
147796
Actinomycetota
TAA
Leu
>WENV180289632
OBIU01000040
506175
Actinomycetota
TTG
Gln
>WENV180289676
OBIU01000054
280470
Actinomycetota
CGT
Thr
>WENV180289992
OBIU01000868
280470
Actinomycetota
CGT
Thr
>WENV180290428
OBIU01020568
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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