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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180305244
OBJL01000033
29387
Gammaproteobacteria
GGA
Ser
>WENV180305307
OBJL01001727
176628
Gammaproteobacteria
GGG
Pro
>WENV180305251
OBJL01000054
400277
Gammaproteobacteria
TTG
Gln
>WENV180305252
OBJL01000054
400277
Gammaproteobacteria
TTG
Gln
>WENV180305289
OBJL01000459
341033
Gammaproteobacteria
GTT
Asn
>WENV180305321
OBJL01004149
281229
Gammaproteobacteria
GTT
Asn
>WENV180305356
OBJL01031014
315963
Gammaproteobacteria
CTT
Lys
>WENV180305302
OBJL01001628
176868
Gammaproteobacteria
CAT
Met
>WENV180305303
OBJL01001665
283441
Gammaproteobacteria
>WENV180305313
OBJL01002838
283441
Gammaproteobacteria
>WENV180305320
OBJL01004131
80948
Gammaproteobacteria
TAA
Leu
>WENV180305266
OBJL01000121
117757
Gammaproteobacteria
>WENV180305329
OBJL01008647
20296
Gammaproteobacteria
TGA
Ser
>WENV180305274
OBJL01000139
175982
Gammaproteobacteria
TCT
Arg
>WENV180305326
OBJL01007023
73161
Gammaproteobacteria
CAG
Leu
>WENV180305234
OBJL01000017
281352
Gammaproteobacteria
TGT
Thr
>WENV180305257
OBJL01000063
281352
Gammaproteobacteria
TGT
Thr
>WENV180305250
OBJL01000054
117758
Gammaproteobacteria
TAG
Leu
>WENV180305276
OBJL01000232
228290
Gammaproteobacteria
CCG
Arg
>WENV180305316
OBJL01003067
117930
Gammaproteobacteria
CAA
Leu
>WENV180305341
OBJL01022033
3987
Gammaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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