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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180316718
OBKI01129597
179231
Actinomycetota
TAC
Val
>WENV180316726
OBKI01135348
280498
Actinomycetota
GTT
Asn
>WENV180316512
OBKI01035734
459899
Actinomycetota
TTC
Glu
>WENV180316589
OBKI01057039
56083
Actinomycetota
CGA
Ser
>WENV180316526
OBKI01037833
140768
Actinomycetota
TAG
Leu
>WENV180316505
OBKI01034672
175837
Actinomycetota
ACG
Arg
>WENV180316574
OBKI01051769
176638
Actinomycetota
GGG
Pro
>WENV180316680
OBKI01096707
176723
Actinomycetota
TCT
Arg
>WENV180316706
OBKI01113532
280523
Actinomycetota
GGC
Ala
>WENV180316333
OBKI01015254
280450
Actinomycetota
TTT
Lys
>WENV180316659
OBKI01086308
480329
Actinomycetota
CCC
Gly
>WENV180316715
OBKI01124105
175882
Actinomycetota
TGG
Pro
>WENV180316493
OBKI01032528
280489
Actinomycetota
CTC
Glu
>WENV180316514
OBKI01035752
280499
Actinomycetota
CCT
Arg
>WENV180316494
OBKI01032528
398853
Actinomycetota
CTG
Gln
>WENV180316525
OBKI01037833
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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