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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
95 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180330461
OBKV01070235
285360
Bacteroidota
TTT
Lys
>WENV180329391
OBKV01001009
117741
Bacteroidota
TAG
Leu
>WENV180329273
OBKV01000611
398829
Bacteroidota
CCT
Arg
>WENV180330795
OBKV01278873
175838
Bacteroidota
GTT
Asn
>WENV180329641
OBKV01003271
175904
Bacteroidota
CGG
Pro
>WENV180329779
OBKV01006131
400161
Bacteroidota
GGT
Thr
>WENV180329034
OBKV01000153
400161
Bacteroidota
GGT
Thr
>WENV180328922
OBKV01000067
289031
Bacteroidota
CAT
Met
>WENV180329598
OBKV01002572
156422
Bacteroidota
TAC
Val
>WENV180329597
OBKV01002572
156422
Bacteroidota
TAC
Val
>WENV180329596
OBKV01002572
156422
Bacteroidota
TAC
Val
>WENV180330717
OBKV01207275
280557
Bacteroidota
CAT
Met
>WENV180330037
OBKV01014879
280557
Bacteroidota
CAT
Met
>WENV180329513
OBKV01001786
280557
Bacteroidota
CAT
Met
>WENV180329756
OBKV01005715
20492
Bacteroidota
GGA
Ser
>WENV180329707
OBKV01004631
20206
Bacteroidota
GGA
Ser
>WENV180329006
OBKV01000125
483416
Bacteroidota
CTG
Gln
>WENV180330289
OBKV01037276
398871
Bacteroidota
TTC
Glu
>WENV180329602
OBKV01002635
201819
Bacteroidota
CAT
Met
>WENV180329453
OBKV01001391
118221
Bacteroidota
CAA
Leu
>WENV180329079
OBKV01000193
118221
Bacteroidota
CAA
Leu
>WENV180329849
OBKV01007962
56493
Bacteroidota
TGA
Ser
>WENV180329274
OBKV01000614
56493
Bacteroidota
TGA
Ser
>WENV180329754
OBKV01005640
175903
Bacteroidota
GTG
His
>WENV180330439
OBKV01062896
351598
Bacteroidota
CGG
Pro
>WENV180330283
OBKV01036962
351598
Bacteroidota
CGG
Pro
>WENV180330114
OBKV01019328
351598
Bacteroidota
CGG
Pro
>WENV180329700
OBKV01004480
351598
Bacteroidota
CGG
Pro
>WENV180329114
OBKV01000234
351598
Bacteroidota
CGG
Pro
>WENV180329316
OBKV01000772
118089
Bacteroidota
TAG
Leu
>WENV180329712
OBKV01004772
398872
Bacteroidota
GGT
Thr
>WENV180330183
OBKV01024043
203954
Bacteroidota
GTC
Asp
>WENV180329742
OBKV01005383
56385
Bacteroidota
TGA
Ser
>WENV180329231
OBKV01000431
56385
Bacteroidota
TGA
Ser
>WENV180329230
OBKV01000431
56385
Bacteroidota
TGA
Ser
>WENV180328871
OBKV01000035
56385
Bacteroidota
TGA
Ser
>WENV180329808
OBKV01006800
182267
Bacteroidota
GTT
Asn
>WENV180329807
OBKV01006800
182267
Bacteroidota
GTT
Asn
>WENV180329328
OBKV01000819
20449
Bacteroidota
GGA
Ser
>WENV180329035
OBKV01000153
312035
Bacteroidota
CCA
Trp
>WENV180329780
OBKV01006131
312035
Bacteroidota
CCA
Trp
>WENV180330796
OBKV01278980
242241
Bacteroidota
GTC
Asp
>WENV180328965
OBKV01000088
242241
Bacteroidota
GTC
Asp
>WENV180328964
OBKV01000088
242241
Bacteroidota
GTC
Asp
>WENV180328963
OBKV01000088
242241
Bacteroidota
GTC
Asp
>WENV180330310
OBKV01039429
56072
Bacteroidota
TAA
Leu
>WENV180329991
OBKV01014028
56072
Bacteroidota
TAA
Leu
>WENV180329747
OBKV01005508
57807
Bacteroidota
TGA
Ser
>WENV180329198
OBKV01000392
175944
Bacteroidota
CAT
Met
>WENV180329976
OBKV01013508
175902
Bacteroidota
GGC
Ala
>WENV180329936
OBKV01011319
175902
Bacteroidota
GGC
Ala
>WENV180328928
OBKV01000073
179697
Bacteroidota
TGT
Thr
>WENV180330522
OBKV01086251
398860
Bacteroidota
CTC
Glu
>WENV180329739
OBKV01005302
480404
Bacteroidota
TTG
Gln
>WENV180329797
OBKV01006519
280451
Bacteroidota
CGT
Thr
>WENV180330427
OBKV01058966
418894
Bacteroidota
TTC
Glu
>WENV180330036
OBKV01014864
99847
Bacteroidota
GTA
Tyr
>WENV180330529
OBKV01088120
399200
Bacteroidota
CAT
Met
>WENV180329365
OBKV01000957
404109
Bacteroidota
CTC
Glu
>WENV180329364
OBKV01000957
404109
Bacteroidota
CTC
Glu
>WENV180329363
OBKV01000957
404109
Bacteroidota
CTC
Glu
>WENV180328959
OBKV01000088
404109
Bacteroidota
CTC
Glu
>WENV180328958
OBKV01000088
404109
Bacteroidota
CTC
Glu
>WENV180328886
OBKV01000040
186874
Bacteroidota
CAT
Met
>WENV180329193
OBKV01000374
46648
Bacteroidota
TAA
Leu
>WENV180329049
OBKV01000173
46648
Bacteroidota
TAA
Leu
>WENV180329455
OBKV01001401
488746
Bacteroidota
CTG
Gln
>WENV180329257
OBKV01000540
280478
Bacteroidota
GCC
Gly
>WENV180329850
OBKV01007962
20766
Bacteroidota
GGA
Ser
>WENV180330233
OBKV01030582
186108
Bacteroidota
GTT
Asn
>WENV180329998
OBKV01014270
175844
Bacteroidota
GGC
Ala
>WENV180330078
OBKV01016319
183889
Bacteroidota
GGC
Ala
>WENV180330349
OBKV01044812
158068
Bacteroidota
GGG
Pro
>WENV180329988
OBKV01013946
186142
Bacteroidota
GAT
Ile
>WENV180330142
OBKV01021016
398828
Bacteroidota
CCG
Arg
>WENV180329541
OBKV01002069
140771
Bacteroidota
>WENV180330789
OBKV01277276
176192
Bacteroidota
TCT
Arg
>WENV180329708
OBKV01004642
176192
Bacteroidota
TCT
Arg
>WENV180329805
OBKV01006659
481328
Bacteroidota
TTG
Gln
>WENV180329051
OBKV01000173
481328
Bacteroidota
TTG
Gln
>WENV180329773
OBKV01006062
400088
Bacteroidota
GGT
Thr
>WENV180329993
OBKV01014053
280446
Bacteroidota
TTT
Lys
>WENV180329898
OBKV01009614
280446
Bacteroidota
TTT
Lys
>WENV180329618
OBKV01002810
280446
Bacteroidota
TTT
Lys
>WENV180329308
OBKV01000759
280446
Bacteroidota
TTT
Lys
>WENV180329798
OBKV01006546
484496
Bacteroidota
TTG
Gln
>WENV180329789
OBKV01006293
484496
Bacteroidota
TTG
Gln
>WENV180329840
OBKV01007743
285750
Bacteroidota
CCC
Gly
>WENV180329423
OBKV01001195
188555
Bacteroidota
CAT
Met
>WENV180329989
OBKV01013946
186143
Bacteroidota
TGC
Ala
>WENV180329687
OBKV01004118
365112
Bacteroidota
TTT
Lys
>WENV180329294
OBKV01000678
365112
Bacteroidota
TTT
Lys
>WENV180330098
OBKV01017925
398836
Bacteroidota
GCA
Cys
>WENV180329851
OBKV01007997
398836
Bacteroidota
GCA
Cys
>WENV180329741
OBKV01005356
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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