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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180359894
OBNS01059699
190614
Alphaproteobacteria
TGG
Pro
>WENV180359550
OBNS01001773
178510
Alphaproteobacteria
ACG
Arg
>WENV180359833
OBNS01043500
179390
Alphaproteobacteria
TGG
Pro
>WENV180359511
OBNS01000582
140963
Alphaproteobacteria
>WENV180359532
OBNS01001374
201940
Alphaproteobacteria
CAT
Met
>WENV180359622
OBNS01007023
481268
Alphaproteobacteria
TCC
Gly
>WENV180359882
OBNS01056028
73490
Alphaproteobacteria
GAG
Leu
>WENV180359486
OBNS01000039
75222
Alphaproteobacteria
GAG
Leu
>WENV180359513
OBNS01000695
399480
Alphaproteobacteria
GAA
Phe
>WENV180359494
OBNS01000123
400384
Alphaproteobacteria
TTC
Glu
>WENV180359487
OBNS01000072
400514
Alphaproteobacteria
TTG
Gln
>WENV180359540
OBNS01001507
180029
Alphaproteobacteria
CAT
Met
>WENV180359804
OBNS01034719
140932
Alphaproteobacteria
>WENV180359695
OBNS01015332
29729
Alphaproteobacteria
GCT
Ser
>WENV180359512
OBNS01000660
435083
Alphaproteobacteria
>WENV180359678
OBNS01012738
178503
Alphaproteobacteria
GGG
Pro
>WENV180359705
OBNS01016867
398998
Alphaproteobacteria
TTG
Gln
>WENV180359978
OBNS01096438
398994
Alphaproteobacteria
GTT
Asn
>WENV180359726
OBNS01021432
281676
Alphaproteobacteria
TAC
Val
>WENV180359500
OBNS01000292
353624
Alphaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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