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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180389760
OBPJ01120638
120026
Bacteroidota
GTA
Tyr
>WENV180389763
OBPJ01123616
281336
Bacteroidota
TCC
Gly
>WENV180389483
OBPJ01026276
227539
Bacteroidota
GTT
Asn
>WENV180389489
OBPJ01027168
193718
Bacteroidota
GTC
Asp
>WENV180389579
OBPJ01050551
178179
Bacteroidota
GGC
Ala
>WENV180389357
OBPJ01005792
399898
Bacteroidota
GGT
Thr
>WENV180389404
OBPJ01011944
176557
Bacteroidota
CAT
Met
>WENV180389542
OBPJ01040260
361792
Bacteroidota
GAA
Phe
>WENV180389621
OBPJ01061677
156424
Bacteroidota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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