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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180400737
OBRJ01000048
172207
Bacteroidota
GGG
Pro
>WENV180400782
OBRJ01000090
172207
Bacteroidota
GGG
Pro
>WENV180400811
OBRJ01000102
172207
Bacteroidota
GGG
Pro
>WENV180401047
OBRJ01000645
117741
Bacteroidota
TAG
Leu
>WENV180400682
OBRJ01000015
398829
Bacteroidota
CCT
Arg
>WENV180401302
OBRJ01043330
175838
Bacteroidota
GTT
Asn
>WENV180400794
OBRJ01000095
73057
Bacteroidota
GAG
Leu
>WENV180400776
OBRJ01000084
280557
Bacteroidota
CAT
Met
>WENV180400893
OBRJ01000196
280557
Bacteroidota
CAT
Met
>WENV180400987
OBRJ01000391
20206
Bacteroidota
GGA
Ser
>WENV180400720
OBRJ01000040
201819
Bacteroidota
CAT
Met
>WENV180400742
OBRJ01000051
56493
Bacteroidota
TGA
Ser
>WENV180400999
OBRJ01000465
175903
Bacteroidota
GTG
His
>WENV180401093
OBRJ01000975
351598
Bacteroidota
CGG
Pro
>WENV180400833
OBRJ01000125
351598
Bacteroidota
CGG
Pro
>WENV180400645
OBRJ01000001
351598
Bacteroidota
CGG
Pro
>WENV180400876
OBRJ01000175
169545
Bacteroidota
TGG
Pro
>WENV180400822
OBRJ01000111
175936
Bacteroidota
CAT
Met
>WENV180401253
OBRJ01021195
178133
Bacteroidota
GAT
Ile
>WENV180400684
OBRJ01000015
56072
Bacteroidota
TAA
Leu
>WENV180401007
OBRJ01000514
175902
Bacteroidota
GGC
Ala
>WENV180400693
OBRJ01000020
398860
Bacteroidota
CTC
Glu
>WENV180400733
OBRJ01000043
480404
Bacteroidota
TTG
Gln
>WENV180400758
OBRJ01000075
280451
Bacteroidota
CGT
Thr
>WENV180400674
OBRJ01000011
99847
Bacteroidota
GTA
Tyr
>WENV180400805
OBRJ01000099
99847
Bacteroidota
GTA
Tyr
>WENV180400839
OBRJ01000135
99847
Bacteroidota
GTA
Tyr
>WENV180400783
OBRJ01000090
488746
Bacteroidota
CTG
Gln
>WENV180400714
OBRJ01000038
399026
Bacteroidota
CCT
Arg
>WENV180400661
OBRJ01000005
27524
Bacteroidota
GGA
Ser
>WENV180400798
OBRJ01000095
280532
Bacteroidota
>WENV180400669
OBRJ01000008
229246
Bacteroidota
GGC
Ala
>WENV180400736
OBRJ01000048
480318
Bacteroidota
CTG
Gln
>WENV180400868
OBRJ01000166
398828
Bacteroidota
CCG
Arg
>WENV180401030
OBRJ01000576
140771
Bacteroidota
>WENV180401027
OBRJ01000576
140771
Bacteroidota
>WENV180400649
OBRJ01000002
176192
Bacteroidota
TCT
Arg
>WENV180400929
OBRJ01000251
69204
Bacteroidota
TGA
Ser
>WENV180400746
OBRJ01000058
69204
Bacteroidota
TGA
Ser
>WENV180400745
OBRJ01000058
69204
Bacteroidota
TGA
Ser
>WENV180400963
OBRJ01000302
280446
Bacteroidota
TTT
Lys
>WENV180400897
OBRJ01000217
280446
Bacteroidota
TTT
Lys
>WENV180400869
OBRJ01000168
280446
Bacteroidota
TTT
Lys
>WENV180400867
OBRJ01000163
280446
Bacteroidota
TTT
Lys
>WENV180400656
OBRJ01000003
484496
Bacteroidota
TTG
Gln
>WENV180400673
OBRJ01000010
27502
Bacteroidota
GGA
Ser
>WENV180400920
OBRJ01000241
27502
Bacteroidota
GGA
Ser
>WENV180400646
OBRJ01000001
117804
Bacteroidota
TAG
Leu
>WENV180400652
OBRJ01000002
365112
Bacteroidota
TTT
Lys
>WENV180400642
OBRJ01000001
365112
Bacteroidota
TTT
Lys
>WENV180401119
OBRJ01001269
398836
Bacteroidota
GCA
Cys
>WENV180400864
OBRJ01000159
398836
Bacteroidota
GCA
Cys
>WENV180400786
OBRJ01000092
398836
Bacteroidota
GCA
Cys
>WENV180400749
OBRJ01000068
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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