This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180402829
OBRR01000061
400161
Bacteroidota
GGT
Thr
>WENV180402944
OBRR01000809
400161
Bacteroidota
GGT
Thr
>WENV180403257
OBRR01065977
400161
Bacteroidota
GGT
Thr
>WENV180402989
OBRR01001361
156422
Bacteroidota
TAC
Val
>WENV180403305
OBRR01085818
156422
Bacteroidota
TAC
Val
>WENV180402832
OBRR01000063
282852
Bacteroidota
TTT
Lys
>WENV180403077
OBRR01008903
280557
Bacteroidota
CAT
Met
>WENV180402831
OBRR01000062
201819
Bacteroidota
CAT
Met
>WENV180402847
OBRR01000103
201819
Bacteroidota
CAT
Met
>WENV180403295
OBRR01083649
118221
Bacteroidota
CAA
Leu
>WENV180403046
OBRR01003930
118221
Bacteroidota
CAA
Leu
>WENV180402857
OBRR01000139
118221
Bacteroidota
CAA
Leu
>WENV180403293
OBRR01082976
56385
Bacteroidota
TGA
Ser
>WENV180403287
OBRR01081989
56385
Bacteroidota
TGA
Ser
>WENV180403156
OBRR01025212
56385
Bacteroidota
TGA
Ser
>WENV180402950
OBRR01000870
57645
Bacteroidota
TGA
Ser
>WENV180402911
OBRR01000471
57645
Bacteroidota
TGA
Ser
>WENV180403053
OBRR01004679
182267
Bacteroidota
GTT
Asn
>WENV180403052
OBRR01004679
182267
Bacteroidota
GTT
Asn
>WENV180403051
OBRR01004679
182267
Bacteroidota
GTT
Asn
>WENV180403019
OBRR01002305
312035
Bacteroidota
CCA
Trp
>WENV180403286
OBRR01081929
242241
Bacteroidota
GTC
Asp
>WENV180403064
OBRR01006165
242241
Bacteroidota
GTC
Asp
>WENV180403029
OBRR01002619
242241
Bacteroidota
GTC
Asp
>WENV180403007
OBRR01002005
242241
Bacteroidota
GTC
Asp
>WENV180403006
OBRR01002005
242241
Bacteroidota
GTC
Asp
>WENV180402926
OBRR01000705
242241
Bacteroidota
GTC
Asp
>WENV180403307
OBRR01085885
404109
Bacteroidota
CTC
Glu
>WENV180403283
OBRR01081358
404109
Bacteroidota
CTC
Glu
>WENV180403120
OBRR01016765
404109
Bacteroidota
CTC
Glu
>WENV180403045
OBRR01003888
404109
Bacteroidota
CTC
Glu
>WENV180402977
OBRR01001034
46648
Bacteroidota
TAA
Leu
>WENV180402879
OBRR01000222
46648
Bacteroidota
TAA
Leu
>WENV180402866
OBRR01000167
46648
Bacteroidota
TAA
Leu
>WENV180403043
OBRR01003832
488746
Bacteroidota
CTG
Gln
>WENV180402941
OBRR01000803
118432
Bacteroidota
CAG
Leu
>WENV180402979
OBRR01001073
187400
Bacteroidota
GTT
Asn
>WENV180402937
OBRR01000790
187400
Bacteroidota
GTT
Asn
>WENV180402812
OBRR01000018
191205
Bacteroidota
TGG
Pro
>WENV180403183
OBRR01031029
140771
Bacteroidota
>WENV180402999
OBRR01001752
481328
Bacteroidota
TTG
Gln
>WENV180402935
OBRR01000769
491385
Bacteroidota
TTG
Gln
>WENV180403049
OBRR01004066
280446
Bacteroidota
TTT
Lys
>WENV180403062
OBRR01005778
484496
Bacteroidota
TTG
Gln
>WENV180402908
OBRR01000409
170323
Bacteroidota
GGG
Pro
>WENV180402869
OBRR01000172
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK