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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180404731
OBSA01038917
280500
Bacillota
TGC
Ala
>WENV180404849
OBSA01067652
405363
Bacillota
GCA
Cys
>WENV180404905
OBSA01086472
280428
Bacillota
GAA
Phe
>WENV180404916
OBSA01089697
175842
Bacillota
CAC
Val
>WENV180404952
OBSA01106096
141334
Bacillota
TAG
Leu
>WENV180404599
OBSA01012886
190476
Bacillota
CAT
Met
>WENV180404561
OBSA01008221
280447
Bacillota
GAC
Val
>WENV180405052
OBSA01149408
5692
Bacillota
GCT
Ser
>WENV180404741
OBSA01040671
175825
Bacillota
GAT
Ile
>WENV180404996
OBSA01124424
189473
Bacillota
GAT
Ile
>WENV180404832
OBSA01061004
291581
Bacillota
CGG
Pro
>WENV180405004
OBSA01127386
175859
Bacillota
TCT
Arg
>WENV180404740
OBSA01040671
280436
Bacillota
TGC
Ala
>WENV180404831
OBSA01061004
480322
Bacillota
CTG
Gln
>WENV180405024
OBSA01135117
120584
Bacillota
GTA
Tyr
>WENV180404434
OBSA01001538
322848
Bacillota
CTT
Lys
>WENV180404688
OBSA01030033
280444
Bacillota
GGT
Thr
>WENV180404705
OBSA01032501
179755
Bacillota
CCG
Arg
>WENV180404882
OBSA01077250
282755
Bacillota
GGT
Thr
>WENV180405023
OBSA01135117
399260
Bacillota
TGT
Thr
>WENV180404816
OBSA01056705
398833
Bacillota
TGT
Thr
>WENV180405054
OBSA01152538
56074
Bacillota
TGA
Ser
>WENV180404977
OBSA01117431
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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