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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180405076
OBSA01161713
400161
Bacteroidota
GGT
Thr
>WENV180404369
OBSA01000256
156422
Bacteroidota
TAC
Val
>WENV180404480
OBSA01002869
156422
Bacteroidota
TAC
Val
>WENV180404271
OBSA01000011
201819
Bacteroidota
CAT
Met
>WENV180404364
OBSA01000232
118221
Bacteroidota
CAA
Leu
>WENV180404513
OBSA01004198
118221
Bacteroidota
CAA
Leu
>WENV180404539
OBSA01005673
118221
Bacteroidota
CAA
Leu
>WENV180404397
OBSA01000709
56385
Bacteroidota
TGA
Ser
>WENV180404398
OBSA01000709
56385
Bacteroidota
TGA
Ser
>WENV180404586
OBSA01011479
56385
Bacteroidota
TGA
Ser
>WENV180404432
OBSA01001470
312035
Bacteroidota
CCA
Trp
>WENV180404422
OBSA01001275
175944
Bacteroidota
CAT
Met
>WENV180404578
OBSA01010619
179697
Bacteroidota
TGT
Thr
>WENV180404373
OBSA01000324
404109
Bacteroidota
CTC
Glu
>WENV180404353
OBSA01000154
404109
Bacteroidota
CTC
Glu
>WENV180404352
OBSA01000154
404109
Bacteroidota
CTC
Glu
>WENV180404280
OBSA01000015
404109
Bacteroidota
CTC
Glu
>WENV180404279
OBSA01000015
404109
Bacteroidota
CTC
Glu
>WENV180404450
OBSA01002013
46648
Bacteroidota
TAA
Leu
>WENV180404387
OBSA01000495
46648
Bacteroidota
TAA
Leu
>WENV180404357
OBSA01000198
46648
Bacteroidota
TAA
Leu
>WENV180404343
OBSA01000116
118432
Bacteroidota
CAG
Leu
>WENV180404798
OBSA01052556
187400
Bacteroidota
GTT
Asn
>WENV180404595
OBSA01012310
187814
Bacteroidota
GTC
Asp
>WENV180404555
OBSA01007277
187814
Bacteroidota
GTC
Asp
>WENV180404512
OBSA01004158
187814
Bacteroidota
GTC
Asp
>WENV180404390
OBSA01000569
187814
Bacteroidota
GTC
Asp
>WENV180404389
OBSA01000503
187814
Bacteroidota
GTC
Asp
>WENV180404640
OBSA01019924
158068
Bacteroidota
GGG
Pro
>WENV180404268
OBSA01000009
191205
Bacteroidota
TGG
Pro
>WENV180404267
OBSA01000009
191205
Bacteroidota
TGG
Pro
>WENV180404458
OBSA01002064
481328
Bacteroidota
TTG
Gln
>WENV180404297
OBSA01000027
491385
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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