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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180406553
OBUP01000281
176499
Actinomycetota
CAT
Met
>WENV180406515
OBUP01000171
349003
Actinomycetota
CCG
Arg
>WENV180406482
OBUP01000114
147806
Actinomycetota
TAA
Leu
>WENV180406562
OBUP01000363
280498
Actinomycetota
GTT
Asn
>WENV180406575
OBUP01000439
280498
Actinomycetota
GTT
Asn
>WENV180406585
OBUP01000516
295964
Actinomycetota
GTT
Asn
>WENV180406511
OBUP01000161
140768
Actinomycetota
TAG
Leu
>WENV180406535
OBUP01000211
175837
Actinomycetota
ACG
Arg
>WENV180406534
OBUP01000211
175837
Actinomycetota
ACG
Arg
>WENV180406443
OBUP01000058
176638
Actinomycetota
GGG
Pro
>WENV180406528
OBUP01000193
280524
Actinomycetota
TGC
Ala
>WENV180406460
OBUP01000086
176723
Actinomycetota
TCT
Arg
>WENV180406545
OBUP01000228
280523
Actinomycetota
GGC
Ala
>WENV180406529
OBUP01000193
280523
Actinomycetota
GGC
Ala
>WENV180406531
OBUP01000196
176555
Actinomycetota
CAT
Met
>WENV180406450
OBUP01000074
280450
Actinomycetota
TTT
Lys
>WENV180406508
OBUP01000145
56166
Actinomycetota
TGA
Ser
>WENV180406456
OBUP01000081
480329
Actinomycetota
CCC
Gly
>WENV180406449
OBUP01000073
175882
Actinomycetota
TGG
Pro
>WENV180406451
OBUP01000076
20209
Actinomycetota
GAG
Leu
>WENV180406444
OBUP01000058
480319
Actinomycetota
TTG
Gln
>WENV180406487
OBUP01000119
280489
Actinomycetota
CTC
Glu
>WENV180406557
OBUP01000313
280499
Actinomycetota
CCT
Arg
>WENV180406488
OBUP01000119
398853
Actinomycetota
CTG
Gln
>WENV180406448
OBUP01000073
176642
Actinomycetota
CAA
Leu
>WENV180406455
OBUP01000081
104211
Actinomycetota
CAG
Leu
>WENV180406552
OBUP01000281
117903
Actinomycetota
GTA
Tyr
>WENV180406510
OBUP01000161
280470
Actinomycetota
CGT
Thr
>WENV180406549
OBUP01000235
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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