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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180412100
OBVA01000030
117741
Bacteroidota
TAG
Leu
>WENV180412082
OBVA01000008
398829
Bacteroidota
CCT
Arg
>WENV180412270
OBVA01000458
175838
Bacteroidota
GTT
Asn
>WENV180412271
OBVA01000458
175838
Bacteroidota
GTT
Asn
>WENV180412323
OBVA01000682
404226
Bacteroidota
CCT
Arg
>WENV180412491
OBVA01002185
175904
Bacteroidota
CGG
Pro
>WENV180412573
OBVA01003792
175904
Bacteroidota
CGG
Pro
>WENV180412668
OBVA01006379
289031
Bacteroidota
CAT
Met
>WENV180412257
OBVA01000442
280553
Bacteroidota
TTT
Lys
>WENV180412498
OBVA01002359
280553
Bacteroidota
TTT
Lys
>WENV180412163
OBVA01000136
280557
Bacteroidota
CAT
Met
>WENV180412087
OBVA01000009
20206
Bacteroidota
GGA
Ser
>WENV180412321
OBVA01000682
398871
Bacteroidota
TTC
Glu
>WENV180412322
OBVA01000682
398871
Bacteroidota
TTC
Glu
>WENV180412195
OBVA01000207
201819
Bacteroidota
CAT
Met
>WENV180412206
OBVA01000244
56493
Bacteroidota
TGA
Ser
>WENV180412660
OBVA01005773
175906
Bacteroidota
GTG
His
>WENV180412101
OBVA01000031
175903
Bacteroidota
GTG
His
>WENV180412233
OBVA01000314
118089
Bacteroidota
TAG
Leu
>WENV180412574
OBVA01003792
280530
Bacteroidota
CCA
Trp
>WENV180412642
OBVA01005099
280530
Bacteroidota
CCA
Trp
>WENV180412423
OBVA01001384
178907
Bacteroidota
TCT
Arg
>WENV180412214
OBVA01000262
20449
Bacteroidota
GGA
Ser
>WENV180412419
OBVA01001343
20449
Bacteroidota
GGA
Ser
>WENV180412554
OBVA01003417
20449
Bacteroidota
GGA
Ser
>WENV180412661
OBVA01005794
21127
Bacteroidota
GGA
Ser
>WENV180412084
OBVA01000008
56072
Bacteroidota
TAA
Leu
>WENV180412192
OBVA01000197
57807
Bacteroidota
TGA
Ser
>WENV180412078
OBVA01000005
175902
Bacteroidota
GGC
Ala
>WENV180412778
OBVA01015557
280451
Bacteroidota
CGT
Thr
>WENV180412267
OBVA01000458
99847
Bacteroidota
GTA
Tyr
>WENV180412134
OBVA01000055
99847
Bacteroidota
GTA
Tyr
>WENV180412583
OBVA01004119
399200
Bacteroidota
CAT
Met
>WENV180412604
OBVA01004328
186874
Bacteroidota
CAT
Met
>WENV180412572
OBVA01003776
178179
Bacteroidota
GGC
Ala
>WENV180412086
OBVA01000009
488746
Bacteroidota
CTG
Gln
>WENV180412563
OBVA01003596
280478
Bacteroidota
GCC
Gly
>WENV180412502
OBVA01002418
280478
Bacteroidota
GCC
Gly
>WENV180412440
OBVA01001582
280478
Bacteroidota
GCC
Gly
>WENV180412753
OBVA01012371
186108
Bacteroidota
GTT
Asn
>WENV180412085
OBVA01000009
158068
Bacteroidota
GGG
Pro
>WENV180412136
OBVA01000077
398828
Bacteroidota
CCG
Arg
>WENV180412564
OBVA01003596
74084
Bacteroidota
CAG
Leu
>WENV180412557
OBVA01003458
74084
Bacteroidota
CAG
Leu
>WENV180412503
OBVA01002418
74084
Bacteroidota
CAG
Leu
>WENV180412791
OBVA01019930
480325
Bacteroidota
CTG
Gln
>WENV180412121
OBVA01000046
140771
Bacteroidota
>WENV180412118
OBVA01000046
140771
Bacteroidota
>WENV180412749
OBVA01011795
400088
Bacteroidota
GGT
Thr
>WENV180412408
OBVA01001281
280446
Bacteroidota
TTT
Lys
>WENV180412079
OBVA01000006
280446
Bacteroidota
TTT
Lys
>WENV180412095
OBVA01000021
484496
Bacteroidota
TTG
Gln
>WENV180412497
OBVA01002349
285750
Bacteroidota
CCC
Gly
>WENV180412691
OBVA01007196
398836
Bacteroidota
GCA
Cys
>WENV180412240
OBVA01000342
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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