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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
136 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180416271
OBVG01000601
99852
Bacillota
GTA
Tyr
>WENV180416297
OBVG01000675
99852
Bacillota
GTA
Tyr
>WENV180416206
OBVG01000430
343590
Bacillota
GCC
Gly
>WENV180416731
OBVG01078664
343590
Bacillota
GCC
Gly
>WENV180416542
OBVG01007695
280500
Bacillota
TGC
Ala
>WENV180416607
OBVG01017622
280500
Bacillota
TGC
Ala
>WENV180416678
OBVG01042161
280500
Bacillota
TGC
Ala
>WENV180416143
OBVG01000306
349107
Bacillota
GCC
Gly
>WENV180416147
OBVG01000306
349107
Bacillota
GCC
Gly
>WENV180416269
OBVG01000601
349107
Bacillota
GCC
Gly
>WENV180416440
OBVG01002005
349107
Bacillota
GCC
Gly
>WENV180416270
OBVG01000601
405363
Bacillota
GCA
Cys
>WENV180416666
OBVG01035396
184537
Bacillota
ACG
Arg
>WENV180416237
OBVG01000493
290391
Bacillota
TAC
Val
>WENV180416104
OBVG01000232
290391
Bacillota
TAC
Val
>WENV180416061
OBVG01000193
290391
Bacillota
TAC
Val
>WENV180416439
OBVG01002005
280428
Bacillota
GAA
Phe
>WENV180416146
OBVG01000306
280428
Bacillota
GAA
Phe
>WENV180416617
OBVG01018642
141454
Bacillota
TAG
Leu
>WENV180416699
OBVG01051460
480359
Bacillota
TCC
Gly
>WENV180416332
OBVG01000826
229015
Bacillota
GTG
His
>WENV180416046
OBVG01000180
179917
Bacillota
CAT
Met
>WENV180416628
OBVG01021494
296855
Bacillota
GGT
Thr
>WENV180416470
OBVG01002325
48505
Bacillota
TGA
Ser
>WENV180416383
OBVG01001165
302145
Bacillota
GAA
Phe
>WENV180416289
OBVG01000655
302145
Bacillota
GAA
Phe
>WENV180416144
OBVG01000306
280466
Bacillota
TAC
Val
>WENV180416615
OBVG01018642
418726
Bacillota
TGT
Thr
>WENV180416599
OBVG01016494
280642
Bacillota
TTG
Gln
>WENV180416162
OBVG01000330
175842
Bacillota
CAC
Val
>WENV180416600
OBVG01016494
280639
Bacillota
TTT
Lys
>WENV180416258
OBVG01000558
228119
Bacillota
TCT
Arg
>WENV180416192
OBVG01000404
228119
Bacillota
TCT
Arg
>WENV180416588
OBVG01015933
348419
Bacillota
GTT
Asn
>WENV180416236
OBVG01000486
184497
Bacillota
GGG
Pro
>WENV180416612
OBVG01018642
298270
Bacillota
TAC
Val
>WENV180416526
OBVG01006053
176018
Bacillota
CAT
Met
>WENV180416487
OBVG01003089
179176
Bacillota
ACG
Arg
>WENV180416359
OBVG01000981
20932
Bacillota
GCT
Ser
>WENV180416504
OBVG01003839
291553
Bacillota
GAA
Phe
>WENV180416216
OBVG01000454
190476
Bacillota
CAT
Met
>WENV180416349
OBVG01000896
482593
Bacillota
CCC
Gly
>WENV180416598
OBVG01016494
176014
Bacillota
TCT
Arg
>WENV180416630
OBVG01021803
339995
Bacillota
TGC
Ala
>WENV180416268
OBVG01000593
82124
Bacillota
TAA
Leu
>WENV180416364
OBVG01001016
82124
Bacillota
TAA
Leu
>WENV180416390
OBVG01001242
82124
Bacillota
TAA
Leu
>WENV180416389
OBVG01001230
20942
Bacillota
GGA
Ser
>WENV180416264
OBVG01000581
73664
Bacillota
CAG
Leu
>WENV180416324
OBVG01000799
280447
Bacillota
GAC
Val
>WENV180416130
OBVG01000283
280447
Bacillota
GAC
Val
>WENV180416601
OBVG01016494
480360
Bacillota
GCA
Cys
>WENV180416164
OBVG01000336
5692
Bacillota
GCT
Ser
>WENV180416443
OBVG01002007
175825
Bacillota
GAT
Ile
>WENV180416576
OBVG01012883
284723
Bacillota
TAC
Val
>WENV180416306
OBVG01000744
284723
Bacillota
TAC
Val
>WENV180416386
OBVG01001198
73009
Bacillota
CAG
Leu
>WENV180416181
OBVG01000394
73009
Bacillota
CAG
Leu
>WENV180416684
OBVG01043816
280646
Bacillota
TGC
Ala
>WENV180416184
OBVG01000394
291581
Bacillota
CGG
Pro
>WENV180416176
OBVG01000387
175859
Bacillota
TCT
Arg
>WENV180416705
OBVG01057929
398835
Bacillota
GCC
Gly
>WENV180416442
OBVG01002007
280436
Bacillota
TGC
Ala
>WENV180416632
OBVG01022698
175847
Bacillota
GTC
Asp
>WENV180416614
OBVG01018642
280641
Bacillota
GTT
Asn
>WENV180416121
OBVG01000276
175831
Bacillota
ACG
Arg
>WENV180416629
OBVG01021494
184495
Bacillota
CAT
Met
>WENV180416667
OBVG01035669
141202
Bacillota
CAA
Leu
>WENV180416331
OBVG01000826
179810
Bacillota
TCT
Arg
>WENV180416155
OBVG01000320
284627
Bacillota
GAA
Phe
>WENV180416603
OBVG01016494
280640
Bacillota
TAC
Val
>WENV180416623
OBVG01021378
175916
Bacillota
GAT
Ile
>WENV180416183
OBVG01000394
480322
Bacillota
CTG
Gln
>WENV180416150
OBVG01000318
480322
Bacillota
CTG
Gln
>WENV180415934
OBVG01000061
187364
Bacillota
CAT
Met
>WENV180416127
OBVG01000281
401685
Bacillota
TTG
Gln
>WENV180416312
OBVG01000759
175868
Bacillota
GTT
Asn
>WENV180416301
OBVG01000721
175868
Bacillota
GTT
Asn
>WENV180416426
OBVG01001778
289716
Bacillota
GTG
His
>WENV180416292
OBVG01000662
322848
Bacillota
CTT
Lys
>WENV180416311
OBVG01000759
398854
Bacillota
CTC
Glu
>WENV180416276
OBVG01000619
291576
Bacillota
CCC
Gly
>WENV180416509
OBVG01004063
497729
Bacillota
CCA
Trp
>WENV180416448
OBVG01002057
497729
Bacillota
CCA
Trp
>WENV180416284
OBVG01000647
497729
Bacillota
CCA
Trp
>WENV180416166
OBVG01000346
497729
Bacillota
CCA
Trp
>WENV180416455
OBVG01002115
180688
Bacillota
GTC
Asp
>WENV180416103
OBVG01000232
180688
Bacillota
GTC
Asp
>WENV180416060
OBVG01000193
180688
Bacillota
GTC
Asp
>WENV180416696
OBVG01048179
175899
Bacillota
GTC
Asp
>WENV180416694
OBVG01046835
73638
Bacillota
AAG
Leu
>WENV180416519
OBVG01005020
480337
Bacillota
TCC
Gly
>WENV180416501
OBVG01003638
292374
Bacillota
TGC
Ala
>WENV180416589
OBVG01015933
398857
Bacillota
TTC
Glu
>WENV180416641
OBVG01025668
280444
Bacillota
GGT
Thr
>WENV180416229
OBVG01000478
280444
Bacillota
GGT
Thr
>WENV180416053
OBVG01000185
483485
Bacillota
CCC
Gly
>WENV180416546
OBVG01008086
291597
Bacillota
TGC
Ala
>WENV180416412
OBVG01001456
333281
Bacillota
GTT
Asn
>WENV180416218
OBVG01000454
179755
Bacillota
CCG
Arg
>WENV180416503
OBVG01003839
280547
Bacillota
GTC
Asp
>WENV180416001
OBVG01000120
58120
Bacillota
AAG
Leu
>WENV180416161
OBVG01000327
58120
Bacillota
AAG
Leu
>WENV180416411
OBVG01001456
445407
Bacillota
GCC
Gly
>WENV180416413
OBVG01001456
289761
Bacillota
TTT
Lys
>WENV180416594
OBVG01015933
46835
Bacillota
TAA
Leu
>WENV180416613
OBVG01018642
235661
Bacillota
GTC
Asp
>WENV180416217
OBVG01000454
398832
Bacillota
TTC
Glu
>WENV180416267
OBVG01000593
118669
Bacillota
GTA
Tyr
>WENV180416673
OBVG01041479
294275
Bacillota
TGC
Ala
>WENV180416167
OBVG01000351
52748
Bacillota
TGA
Ser
>WENV180416553
OBVG01008461
52748
Bacillota
TGA
Ser
>WENV180416580
OBVG01012963
280476
Bacillota
TTT
Lys
>WENV180416521
OBVG01005471
280476
Bacillota
TTT
Lys
>WENV180416260
OBVG01000558
280476
Bacillota
TTT
Lys
>WENV180416188
OBVG01000404
280476
Bacillota
TTT
Lys
>WENV180416660
OBVG01033405
332651
Bacillota
GTT
Asn
>WENV180416378
OBVG01001150
398852
Bacillota
CTC
Glu
>WENV180416051
OBVG01000183
321248
Bacillota
TAC
Val
>WENV180416157
OBVG01000325
406186
Bacillota
CTC
Glu
>WENV180416158
OBVG01000325
406186
Bacillota
CTC
Glu
>WENV180416159
OBVG01000325
406186
Bacillota
CTC
Glu
>WENV180416449
OBVG01002102
175857
Bacillota
GTG
His
>WENV180416126
OBVG01000281
175857
Bacillota
GTG
His
>WENV180416369
OBVG01001093
398833
Bacillota
TGT
Thr
>WENV180416101
OBVG01000232
285556
Bacillota
TGT
Thr
>WENV180416062
OBVG01000193
285556
Bacillota
TGT
Thr
>WENV180416733
OBVG01079097
175849
Bacillota
GTC
Asp
>WENV180416441
OBVG01002005
175849
Bacillota
GTC
Asp
>WENV180416228
OBVG01000478
175849
Bacillota
GTC
Asp
>WENV180416145
OBVG01000306
175849
Bacillota
GTC
Asp
>WENV180416609
OBVG01018197
280486
Bacillota
TGC
Ala
>WENV180416587
OBVG01015256
280486
Bacillota
TGC
Ala
>WENV180416163
OBVG01000336
56074
Bacillota
TGA
Ser
>WENV180416626
OBVG01021435
443965
Bacillota
>WENV180416523
OBVG01005807
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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