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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
75 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180418935
OBVL01001596
176499
Actinomycetota
CAT
Met
>WENV180418772
OBVL01000065
175907
Actinomycetota
TAC
Val
>WENV180418941
OBVL01002246
283311
Actinomycetota
CCT
Arg
>WENV180418884
OBVL01000425
316729
Actinomycetota
CAC
Val
>WENV180418910
OBVL01000632
316729
Actinomycetota
CAC
Val
>WENV180418852
OBVL01000231
295964
Actinomycetota
GTT
Asn
>WENV180418853
OBVL01000231
295964
Actinomycetota
GTT
Asn
>WENV180418867
OBVL01000318
295964
Actinomycetota
GTT
Asn
>WENV180418873
OBVL01000350
295964
Actinomycetota
GTT
Asn
>WENV180418880
OBVL01000406
56083
Actinomycetota
CGA
Ser
>WENV180418812
OBVL01000116
140768
Actinomycetota
TAG
Leu
>WENV180418940
OBVL01002031
56384
Actinomycetota
TGA
Ser
>WENV180418942
OBVL01002266
176075
Actinomycetota
TCT
Arg
>WENV180418827
OBVL01000152
176075
Actinomycetota
TCT
Arg
>WENV180418848
OBVL01000202
175848
Actinomycetota
TGG
Pro
>WENV180418849
OBVL01000211
176078
Actinomycetota
GGG
Pro
>WENV180418928
OBVL01001303
176078
Actinomycetota
GGG
Pro
>WENV180418845
OBVL01000197
20208
Actinomycetota
GAG
Leu
>WENV180418949
OBVL01003137
482604
Actinomycetota
TTG
Gln
>WENV180418943
OBVL01002300
482604
Actinomycetota
TTG
Gln
>WENV180418905
OBVL01000584
59689
Actinomycetota
GGA
Ser
>WENV180418878
OBVL01000373
59689
Actinomycetota
GGA
Ser
>WENV180418931
OBVL01001501
175837
Actinomycetota
ACG
Arg
>WENV180418810
OBVL01000113
175837
Actinomycetota
ACG
Arg
>WENV180418809
OBVL01000113
175837
Actinomycetota
ACG
Arg
>WENV180418805
OBVL01000105
29393
Actinomycetota
GCT
Ser
>WENV180418836
OBVL01000166
280549
Actinomycetota
CAC
Val
>WENV180418863
OBVL01000281
280549
Actinomycetota
CAC
Val
>WENV180418944
OBVL01002307
56383
Actinomycetota
CGA
Ser
>WENV180418858
OBVL01000265
280702
Actinomycetota
GGC
Ala
>WENV180418857
OBVL01000265
280702
Actinomycetota
GGC
Ala
>WENV180418961
OBVL01003750
140878
Actinomycetota
TAA
Leu
>WENV180418891
OBVL01000452
176077
Actinomycetota
CAT
Met
>WENV180418930
OBVL01001342
283312
Actinomycetota
GTG
His
>WENV180418924
OBVL01000998
280524
Actinomycetota
TGC
Ala
>WENV180418888
OBVL01000439
280524
Actinomycetota
TGC
Ala
>WENV180418918
OBVL01000727
283313
Actinomycetota
CCG
Arg
>WENV180418908
OBVL01000613
398948
Actinomycetota
TTC
Glu
>WENV180418877
OBVL01000371
398948
Actinomycetota
TTC
Glu
>WENV180418782
OBVL01000079
150272
Actinomycetota
TAA
Leu
>WENV180418934
OBVL01001596
117777
Actinomycetota
>WENV180418803
OBVL01000105
117777
Actinomycetota
>WENV180418906
OBVL01000587
280523
Actinomycetota
GGC
Ala
>WENV180418911
OBVL01000632
280523
Actinomycetota
GGC
Ala
>WENV180418804
OBVL01000105
175949
Actinomycetota
CAT
Met
>WENV180418862
OBVL01000281
418252
Actinomycetota
GAC
Val
>WENV180418835
OBVL01000166
418252
Actinomycetota
GAC
Val
>WENV180418859
OBVL01000266
191955
Actinomycetota
TGT
Thr
>WENV180418946
OBVL01002913
20415
Actinomycetota
GAG
Leu
>WENV180418865
OBVL01000303
280544
Actinomycetota
GTG
His
>WENV180418813
OBVL01000116
280496
Actinomycetota
CGT
Thr
>WENV180418841
OBVL01000185
280703
Actinomycetota
CCT
Arg
>WENV180418895
OBVL01000507
140879
Actinomycetota
TAG
Leu
>WENV180418938
OBVL01002000
178569
Actinomycetota
CAT
Met
>WENV180418892
OBVL01000470
280450
Actinomycetota
TTT
Lys
>WENV180418872
OBVL01000340
280450
Actinomycetota
TTT
Lys
>WENV180418811
OBVL01000116
323758
Actinomycetota
CGT
Thr
>WENV180418854
OBVL01000235
480329
Actinomycetota
CCC
Gly
>WENV180418962
OBVL01004093
187640
Actinomycetota
TGT
Thr
>WENV180418921
OBVL01000805
99865
Actinomycetota
CAG
Leu
>WENV180418919
OBVL01000770
99865
Actinomycetota
CAG
Leu
>WENV180418917
OBVL01000685
398853
Actinomycetota
CTG
Gln
>WENV180418847
OBVL01000198
398853
Actinomycetota
CTG
Gln
>WENV180418912
OBVL01000653
175843
Actinomycetota
CAA
Leu
>WENV180418886
OBVL01000431
175843
Actinomycetota
CAA
Leu
>WENV180418864
OBVL01000292
56075
Actinomycetota
TGA
Ser
>WENV180418855
OBVL01000257
317680
Actinomycetota
CCG
Arg
>WENV180418916
OBVL01000685
289788
Actinomycetota
CTC
Glu
>WENV180418846
OBVL01000198
289788
Actinomycetota
CTC
Glu
>WENV180418887
OBVL01000439
179238
Actinomycetota
GAT
Ile
>WENV180418894
OBVL01000507
280470
Actinomycetota
CGT
Thr
>WENV180418903
OBVL01000529
480376
Actinomycetota
CCC
Gly
>WENV180418890
OBVL01000450
200276
Actinomycetota
CTT
Lys
>WENV180418927
OBVL01001263
200276
Actinomycetota
CTT
Lys
>WENV180418920
OBVL01000782
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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