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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
101 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180428171
OBWC01000008
172207
Bacteroidota
GGG
Pro
>WENV180428206
OBWC01000020
172207
Bacteroidota
GGG
Pro
>WENV180428722
OBWC01001590
172207
Bacteroidota
GGG
Pro
>WENV180428399
OBWC01000188
117741
Bacteroidota
TAG
Leu
>WENV180428150
OBWC01000002
398829
Bacteroidota
CCT
Arg
>WENV180428515
OBWC01000460
398829
Bacteroidota
CCT
Arg
>WENV180428148
OBWC01000002
175838
Bacteroidota
GTT
Asn
>WENV180428149
OBWC01000002
175838
Bacteroidota
GTT
Asn
>WENV180428273
OBWC01000056
404226
Bacteroidota
CCT
Arg
>WENV180428301
OBWC01000075
175904
Bacteroidota
CGG
Pro
>WENV180428398
OBWC01000186
280553
Bacteroidota
TTT
Lys
>WENV180428396
OBWC01000176
280553
Bacteroidota
TTT
Lys
>WENV180428659
OBWC01001140
280557
Bacteroidota
CAT
Met
>WENV180428522
OBWC01000483
280557
Bacteroidota
CAT
Met
>WENV180428203
OBWC01000020
20206
Bacteroidota
GGA
Ser
>WENV180428275
OBWC01000056
398871
Bacteroidota
TTC
Glu
>WENV180428274
OBWC01000056
398871
Bacteroidota
TTC
Glu
>WENV180428183
OBWC01000012
201819
Bacteroidota
CAT
Met
>WENV180428610
OBWC01000859
56493
Bacteroidota
TGA
Ser
>WENV180428500
OBWC01000398
175906
Bacteroidota
GTG
His
>WENV180428499
OBWC01000398
175906
Bacteroidota
GTG
His
>WENV180428230
OBWC01000033
175903
Bacteroidota
GTG
His
>WENV180428944
OBWC01005332
351598
Bacteroidota
CGG
Pro
>WENV180428678
OBWC01001292
351598
Bacteroidota
CGG
Pro
>WENV180428289
OBWC01000065
351598
Bacteroidota
CGG
Pro
>WENV180428269
OBWC01000051
351598
Bacteroidota
CGG
Pro
>WENV180428293
OBWC01000068
118089
Bacteroidota
TAG
Leu
>WENV180428155
OBWC01000002
398872
Bacteroidota
GGT
Thr
>WENV180428302
OBWC01000075
280530
Bacteroidota
CCA
Trp
>WENV180428198
OBWC01000016
175936
Bacteroidota
CAT
Met
>WENV180428335
OBWC01000100
203954
Bacteroidota
GTC
Asp
>WENV180428334
OBWC01000100
203954
Bacteroidota
GTC
Asp
>WENV180428463
OBWC01000312
178907
Bacteroidota
TCT
Arg
>WENV180428681
OBWC01001321
20449
Bacteroidota
GGA
Ser
>WENV180428456
OBWC01000286
20449
Bacteroidota
GGA
Ser
>WENV180428152
OBWC01000002
56072
Bacteroidota
TAA
Leu
>WENV180428174
OBWC01000010
175902
Bacteroidota
GGC
Ala
>WENV180428558
OBWC01000674
398860
Bacteroidota
CTC
Glu
>WENV180428469
OBWC01000329
398860
Bacteroidota
CTC
Glu
>WENV180428286
OBWC01000062
398860
Bacteroidota
CTC
Glu
>WENV180428643
OBWC01001018
480404
Bacteroidota
TTG
Gln
>WENV180428387
OBWC01000165
480404
Bacteroidota
TTG
Gln
>WENV180428219
OBWC01000026
280451
Bacteroidota
CGT
Thr
>WENV180428649
OBWC01001032
99847
Bacteroidota
GTA
Tyr
>WENV180428162
OBWC01000004
99847
Bacteroidota
GTA
Tyr
>WENV180428154
OBWC01000002
99847
Bacteroidota
GTA
Tyr
>WENV180428402
OBWC01000191
399200
Bacteroidota
CAT
Met
>WENV180428389
OBWC01000168
399200
Bacteroidota
CAT
Met
>WENV180428202
OBWC01000020
488746
Bacteroidota
CTG
Gln
>WENV180428195
OBWC01000016
399026
Bacteroidota
CCT
Arg
>WENV180428395
OBWC01000175
280478
Bacteroidota
GCC
Gly
>WENV180428393
OBWC01000175
280478
Bacteroidota
GCC
Gly
>WENV180428294
OBWC01000072
280478
Bacteroidota
GCC
Gly
>WENV180428200
OBWC01000017
27524
Bacteroidota
GGA
Ser
>WENV180428737
OBWC01001702
175844
Bacteroidota
GGC
Ala
>WENV180428517
OBWC01000475
175844
Bacteroidota
GGC
Ala
>WENV180428428
OBWC01000249
175844
Bacteroidota
GGC
Ala
>WENV180428343
OBWC01000113
280532
Bacteroidota
>WENV180428147
OBWC01000001
229246
Bacteroidota
GGC
Ala
>WENV180428292
OBWC01000068
73011
Bacteroidota
CAA
Leu
>WENV180428170
OBWC01000008
480318
Bacteroidota
CTG
Gln
>WENV180428563
OBWC01000689
398828
Bacteroidota
CCG
Arg
>WENV180428298
OBWC01000075
74084
Bacteroidota
CAG
Leu
>WENV180428295
OBWC01000072
74084
Bacteroidota
CAG
Leu
>WENV180428539
OBWC01000556
159415
Bacteroidota
TAC
Val
>WENV180428538
OBWC01000556
159415
Bacteroidota
TAC
Val
>WENV180428209
OBWC01000021
480325
Bacteroidota
CTG
Gln
>WENV180429201
OBWC01045779
176192
Bacteroidota
TCT
Arg
>WENV180428593
OBWC01000792
176192
Bacteroidota
TCT
Arg
>WENV180428547
OBWC01000602
176192
Bacteroidota
TCT
Arg
>WENV180428178
OBWC01000011
176192
Bacteroidota
TCT
Arg
>WENV180428580
OBWC01000740
69204
Bacteroidota
TGA
Ser
>WENV180428546
OBWC01000599
69204
Bacteroidota
TGA
Ser
>WENV180428426
OBWC01000245
69204
Bacteroidota
TGA
Ser
>WENV180428415
OBWC01000221
69204
Bacteroidota
TGA
Ser
>WENV180428360
OBWC01000135
69204
Bacteroidota
TGA
Ser
>WENV180428340
OBWC01000104
69204
Bacteroidota
TGA
Ser
>WENV180428290
OBWC01000067
69204
Bacteroidota
TGA
Ser
>WENV180428199
OBWC01000017
69204
Bacteroidota
TGA
Ser
>WENV180428207
OBWC01000020
280446
Bacteroidota
TTT
Lys
>WENV180428160
OBWC01000004
280446
Bacteroidota
TTT
Lys
>WENV180428711
OBWC01001527
484496
Bacteroidota
TTG
Gln
>WENV180428660
OBWC01001148
484496
Bacteroidota
TTG
Gln
>WENV180428235
OBWC01000040
484496
Bacteroidota
TTG
Gln
>WENV180428341
OBWC01000105
285750
Bacteroidota
CCC
Gly
>WENV180428165
OBWC01000005
117804
Bacteroidota
TAG
Leu
>WENV180428959
OBWC01005791
365112
Bacteroidota
TTT
Lys
>WENV180428814
OBWC01002452
365112
Bacteroidota
TTT
Lys
>WENV180428629
OBWC01000933
365112
Bacteroidota
TTT
Lys
>WENV180428596
OBWC01000808
365112
Bacteroidota
TTT
Lys
>WENV180428355
OBWC01000128
365112
Bacteroidota
TTT
Lys
>WENV180428317
OBWC01000086
365112
Bacteroidota
TTT
Lys
>WENV180428279
OBWC01000059
365112
Bacteroidota
TTT
Lys
>WENV180428857
OBWC01002809
398836
Bacteroidota
GCA
Cys
>WENV180428820
OBWC01002504
398836
Bacteroidota
GCA
Cys
>WENV180428308
OBWC01000082
398836
Bacteroidota
GCA
Cys
>WENV180428237
OBWC01000042
398836
Bacteroidota
GCA
Cys
>WENV180428216
OBWC01000025
398836
Bacteroidota
GCA
Cys
>WENV180428211
OBWC01000021
398836
Bacteroidota
GCA
Cys
>WENV180428172
OBWC01000009
170323
Bacteroidota
GGG
Pro
>WENV180428626
OBWC01000917
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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