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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180429079
OBWC01015137
293125
Verrucomicrobiota
GAA
Phe
>WENV180428809
OBWC01002369
406350
Verrucomicrobiota
TGT
Thr
>WENV180428974
OBWC01006199
101600
Verrucomicrobiota
AAG
Leu
>WENV180429009
OBWC01008442
293105
Verrucomicrobiota
CAT
Met
>WENV180428999
OBWC01007912
405901
Verrucomicrobiota
GCC
Gly
>WENV180429024
OBWC01010232
483642
Verrucomicrobiota
CCC
Gly
>WENV180428961
OBWC01005905
229220
Verrucomicrobiota
CAT
Met
>WENV180428727
OBWC01001625
8960
Verrucomicrobiota
CGA
Ser
>WENV180428911
OBWC01004601
101463
Verrucomicrobiota
TAA
Leu
>WENV180428885
OBWC01003614
157427
Verrucomicrobiota
GTC
Asp
>WENV180428973
OBWC01006153
120352
Verrucomicrobiota
TAG
Leu
>WENV180428912
OBWC01004601
292636
Verrucomicrobiota
>WENV180429012
OBWC01008635
298263
Verrucomicrobiota
TTC
Glu
>WENV180428905
OBWC01004401
293069
Verrucomicrobiota
CTT
Lys
>WENV180429008
OBWC01008438
406336
Verrucomicrobiota
CCT
Arg
>WENV180428836
OBWC01002600
406369
Verrucomicrobiota
CCG
Arg
>WENV180428966
OBWC01006001
405940
Verrucomicrobiota
GGT
Thr
>WENV180429059
OBWC01014186
187556
Verrucomicrobiota
GGG
Pro
>WENV180428958
OBWC01005749
406037
Verrucomicrobiota
GTG
His
>WENV180429052
OBWC01012983
406360
Verrucomicrobiota
GAC
Val
>WENV180428998
OBWC01007777
187548
Verrucomicrobiota
TCT
Arg
>WENV180428904
OBWC01004401
406040
Verrucomicrobiota
CGT
Thr
>WENV180428838
OBWC01002628
406039
Verrucomicrobiota
CAC
Val
>WENV180428893
OBWC01003962
75458
Verrucomicrobiota
CAG
Leu
>WENV180428995
OBWC01007623
406368
Verrucomicrobiota
TTG
Gln
>WENV180428813
OBWC01002447
21159
Verrucomicrobiota
GGA
Ser
>WENV180428872
OBWC01003183
101461
Verrucomicrobiota
GTA
Tyr
>WENV180428962
OBWC01005908
293095
Verrucomicrobiota
TTT
Lys
>WENV180428924
OBWC01004841
406351
Verrucomicrobiota
GTT
Asn
>WENV180429025
OBWC01010232
507474
Verrucomicrobiota
TCC
Gly
>WENV180429081
OBWC01015192
406346
Verrucomicrobiota
TAC
Val
>WENV180429204
OBWC01046397
8938
Verrucomicrobiota
GCT
Ser
>WENV180429080
OBWC01015137
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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