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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
82 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180430021
OBWF01000012
176499
Actinomycetota
CAT
Met
>WENV180430333
OBWF01000954
175883
Actinomycetota
GAT
Ile
>WENV180430335
OBWF01000954
175883
Actinomycetota
GAT
Ile
>WENV180430158
OBWF01000161
175907
Actinomycetota
TAC
Val
>WENV180430131
OBWF01000108
147806
Actinomycetota
TAA
Leu
>WENV180430047
OBWF01000022
280498
Actinomycetota
GTT
Asn
>WENV180430048
OBWF01000022
280498
Actinomycetota
GTT
Asn
>WENV180430050
OBWF01000022
280498
Actinomycetota
GTT
Asn
>WENV180430448
OBWF01007365
280503
Actinomycetota
CCT
Arg
>WENV180430348
OBWF01001184
295964
Actinomycetota
GTT
Asn
>WENV180430278
OBWF01000481
459899
Actinomycetota
TTC
Glu
>WENV180430284
OBWF01000516
56083
Actinomycetota
CGA
Ser
>WENV180430328
OBWF01000902
140768
Actinomycetota
TAG
Leu
>WENV180430017
OBWF01000012
140768
Actinomycetota
TAG
Leu
>WENV180430342
OBWF01001096
176075
Actinomycetota
TCT
Arg
>WENV180430127
OBWF01000097
176078
Actinomycetota
GGG
Pro
>WENV180430211
OBWF01000261
20208
Actinomycetota
GAG
Leu
>WENV180430156
OBWF01000153
59689
Actinomycetota
GGA
Ser
>WENV180430172
OBWF01000175
175837
Actinomycetota
ACG
Arg
>WENV180430171
OBWF01000175
175837
Actinomycetota
ACG
Arg
>WENV180430038
OBWF01000016
175837
Actinomycetota
ACG
Arg
>WENV180430037
OBWF01000016
175837
Actinomycetota
ACG
Arg
>WENV180430143
OBWF01000130
29393
Actinomycetota
GCT
Ser
>WENV180430503
OBWF01018635
280549
Actinomycetota
CAC
Val
>WENV180430374
OBWF01001643
280549
Actinomycetota
CAC
Val
>WENV180430125
OBWF01000097
280549
Actinomycetota
CAC
Val
>WENV180430153
OBWF01000153
349164
Actinomycetota
CTC
Glu
>WENV180430169
OBWF01000175
280702
Actinomycetota
GGC
Ala
>WENV180430170
OBWF01000175
280702
Actinomycetota
GGC
Ala
>WENV180430265
OBWF01000437
398843
Actinomycetota
GTT
Asn
>WENV180430266
OBWF01000437
398843
Actinomycetota
GTT
Asn
>WENV180430369
OBWF01001598
176077
Actinomycetota
CAT
Met
>WENV180430346
OBWF01001172
241064
Actinomycetota
CTC
Glu
>WENV180430345
OBWF01001172
241064
Actinomycetota
CTC
Glu
>WENV180430306
OBWF01000658
241064
Actinomycetota
CTC
Glu
>WENV180430117
OBWF01000086
176638
Actinomycetota
GGG
Pro
>WENV180430184
OBWF01000203
280524
Actinomycetota
TGC
Ala
>WENV180430521
OBWF01023044
481719
Actinomycetota
GCA
Cys
>WENV180430361
OBWF01001433
398948
Actinomycetota
TTC
Glu
>WENV180430195
OBWF01000234
291585
Actinomycetota
GCC
Gly
>WENV180430247
OBWF01000367
150272
Actinomycetota
TAA
Leu
>WENV180430141
OBWF01000130
117777
Actinomycetota
>WENV180430049
OBWF01000022
280523
Actinomycetota
GGC
Ala
>WENV180430185
OBWF01000203
280523
Actinomycetota
GGC
Ala
>WENV180430142
OBWF01000130
175949
Actinomycetota
CAT
Met
>WENV180430145
OBWF01000133
176555
Actinomycetota
CAT
Met
>WENV180430257
OBWF01000393
191955
Actinomycetota
TGT
Thr
>WENV180430282
OBWF01000498
280544
Actinomycetota
GTG
His
>WENV180430311
OBWF01000707
280536
Actinomycetota
CTT
Lys
>WENV180430310
OBWF01000707
280536
Actinomycetota
CTT
Lys
>WENV180430329
OBWF01000902
280496
Actinomycetota
CGT
Thr
>WENV180430237
OBWF01000337
280703
Actinomycetota
CCT
Arg
>WENV180430351
OBWF01001204
184157
Actinomycetota
TGG
Pro
>WENV180430307
OBWF01000674
175926
Actinomycetota
CAT
Met
>WENV180430077
OBWF01000037
280450
Actinomycetota
TTT
Lys
>WENV180430502
OBWF01018635
468141
Actinomycetota
GAC
Val
>WENV180430124
OBWF01000097
468141
Actinomycetota
GAC
Val
>WENV180430373
OBWF01001643
468141
Actinomycetota
GAC
Val
>WENV180430327
OBWF01000902
323758
Actinomycetota
CGT
Thr
>WENV180430146
OBWF01000148
56166
Actinomycetota
TGA
Ser
>WENV180430246
OBWF01000363
358727
Actinomycetota
CCG
Arg
>WENV180430260
OBWF01000396
358727
Actinomycetota
CCG
Arg
>WENV180430191
OBWF01000223
480329
Actinomycetota
CCC
Gly
>WENV180430305
OBWF01000658
483206
Actinomycetota
CTG
Gln
>WENV180430220
OBWF01000276
175882
Actinomycetota
TGG
Pro
>WENV180430458
OBWF01008414
99865
Actinomycetota
CAG
Leu
>WENV180430272
OBWF01000471
222475
Actinomycetota
CTT
Lys
>WENV180430007
OBWF01000009
480319
Actinomycetota
TTG
Gln
>WENV180430111
OBWF01000079
280499
Actinomycetota
CCT
Arg
>WENV180430015
OBWF01000012
398853
Actinomycetota
CTG
Gln
>WENV180430154
OBWF01000153
398853
Actinomycetota
CTG
Gln
>WENV180430219
OBWF01000276
176642
Actinomycetota
CAA
Leu
>WENV180430225
OBWF01000287
175843
Actinomycetota
CAA
Leu
>WENV180430036
OBWF01000016
203883
Actinomycetota
TCT
Arg
>WENV180430338
OBWF01001007
56075
Actinomycetota
TGA
Ser
>WENV180430022
OBWF01000012
46642
Actinomycetota
CGA
Ser
>WENV180430190
OBWF01000223
104211
Actinomycetota
CAG
Leu
>WENV180430020
OBWF01000012
117903
Actinomycetota
GTA
Tyr
>WENV180430168
OBWF01000175
506175
Actinomycetota
TTG
Gln
>WENV180430016
OBWF01000012
280470
Actinomycetota
CGT
Thr
>WENV180430402
OBWF01003343
480376
Actinomycetota
CCC
Gly
>WENV180430066
OBWF01000031
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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