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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180437404
OBWP01000002
404226
Bacteroidota
CCT
Arg
>WENV180437432
OBWP01000010
175904
Bacteroidota
CGG
Pro
>WENV180437416
OBWP01000005
280553
Bacteroidota
TTT
Lys
>WENV180437500
OBWP01000038
280553
Bacteroidota
TTT
Lys
>WENV180437408
OBWP01000002
398871
Bacteroidota
TTC
Glu
>WENV180437409
OBWP01000002
398871
Bacteroidota
TTC
Glu
>WENV180437605
OBWP01000497
56493
Bacteroidota
TGA
Ser
>WENV180437556
OBWP01000101
175906
Bacteroidota
GTG
His
>WENV180437555
OBWP01000101
175906
Bacteroidota
GTG
His
>WENV180437498
OBWP01000036
118089
Bacteroidota
TAG
Leu
>WENV180437642
OBWP01003708
398872
Bacteroidota
GGT
Thr
>WENV180437459
OBWP01000015
280530
Bacteroidota
CCA
Trp
>WENV180437433
OBWP01000010
280530
Bacteroidota
CCA
Trp
>WENV180437537
OBWP01000061
203954
Bacteroidota
GTC
Asp
>WENV180437536
OBWP01000061
203954
Bacteroidota
GTC
Asp
>WENV180437533
OBWP01000053
178907
Bacteroidota
TCT
Arg
>WENV180437473
OBWP01000021
20449
Bacteroidota
GGA
Ser
>WENV180437435
OBWP01000010
20449
Bacteroidota
GGA
Ser
>WENV180437469
OBWP01000018
399200
Bacteroidota
CAT
Met
>WENV180437445
OBWP01000011
399200
Bacteroidota
CAT
Met
>WENV180437441
OBWP01000010
280478
Bacteroidota
GCC
Gly
>WENV180437439
OBWP01000010
280478
Bacteroidota
GCC
Gly
>WENV180437419
OBWP01000006
280478
Bacteroidota
GCC
Gly
>WENV180437499
OBWP01000038
73011
Bacteroidota
CAA
Leu
>WENV180437442
OBWP01000010
74084
Bacteroidota
CAG
Leu
>WENV180437420
OBWP01000006
74084
Bacteroidota
CAG
Leu
>WENV180437449
OBWP01000012
480325
Bacteroidota
CTG
Gln
>WENV180437448
OBWP01000012
480325
Bacteroidota
CTG
Gln
>WENV180437458
OBWP01000015
400088
Bacteroidota
GGT
Thr
>WENV180437532
OBWP01000053
285750
Bacteroidota
CCC
Gly
>WENV180437450
OBWP01000012
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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