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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180439671
OBWT01002505
362875
Gammaproteobacteria
GAA
Phe
>WENV180439672
OBWT01002505
362875
Gammaproteobacteria
GAA
Phe
>WENV180439627
OBWT01001129
201994
Gammaproteobacteria
TCT
Arg
>WENV180439453
OBWT01000094
481188
Gammaproteobacteria
CCC
Gly
>WENV180439691
OBWT01003506
29399
Gammaproteobacteria
GGA
Ser
>WENV180439646
OBWT01001816
99868
Gammaproteobacteria
TAA
Leu
>WENV180439665
OBWT01002415
184266
Gammaproteobacteria
GAC
Val
>WENV180439676
OBWT01002766
185104
Gammaproteobacteria
CAT
Met
>WENV180439740
OBWT01008542
293263
Gammaproteobacteria
CTT
Lys
>WENV180439552
OBWT01000446
93108
Gammaproteobacteria
CAG
Leu
>WENV180439449
OBWT01000083
93108
Gammaproteobacteria
CAG
Leu
>WENV180439415
OBWT01000066
93108
Gammaproteobacteria
CAG
Leu
>WENV180439705
OBWT01004548
200815
Gammaproteobacteria
CCG
Arg
>WENV180439621
OBWT01001087
20228
Gammaproteobacteria
GCT
Ser
>WENV180439626
OBWT01001126
4023
Gammaproteobacteria
>WENV180439656
OBWT01002027
117788
Gammaproteobacteria
TAG
Leu
>WENV180439459
OBWT01000125
289464
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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