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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180452882
OBXK01000692
284109
Bacillota
>WENV180452700
OBXK01000148
140922
Bacillota
GTA
Tyr
>WENV180452832
OBXK01000426
140922
Bacillota
GTA
Tyr
>WENV180452952
OBXK01010203
292444
Bacillota
CTT
Lys
>WENV180452710
OBXK01000160
284108
Bacillota
GGC
Ala
>WENV180452941
OBXK01006577
184537
Bacillota
ACG
Arg
>WENV180452774
OBXK01000337
20870
Bacillota
CGA
Ser
>WENV180452822
OBXK01000426
178945
Bacillota
GTC
Asp
>WENV180452830
OBXK01000426
178945
Bacillota
GTC
Asp
>WENV180452906
OBXK01001296
179261
Bacillota
CGG
Pro
>WENV180452702
OBXK01000148
407852
Bacillota
TTC
Glu
>WENV180452827
OBXK01000426
407852
Bacillota
TTC
Glu
>WENV180452862
OBXK01000557
400752
Bacillota
GTT
Asn
>WENV180452703
OBXK01000148
284104
Bacillota
CGT
Thr
>WENV180452833
OBXK01000426
481151
Bacillota
CCA
Trp
>WENV180452828
OBXK01000426
4033
Bacillota
TGA
Ser
>WENV180452948
OBXK01009695
20942
Bacillota
GGA
Ser
>WENV180452950
OBXK01010103
184171
Bacillota
CAT
Met
>WENV180452735
OBXK01000214
481244
Bacillota
CCC
Gly
>WENV180452834
OBXK01000426
284111
Bacillota
GTG
His
>WENV180452826
OBXK01000426
20502
Bacillota
GCT
Ser
>WENV180452767
OBXK01000316
56503
Bacillota
CAG
Leu
>WENV180452831
OBXK01000426
284110
Bacillota
GAA
Phe
>WENV180452709
OBXK01000160
284107
Bacillota
CGC
Ala
>WENV180452813
OBXK01000426
282730
Bacillota
TAC
Val
>WENV180452870
OBXK01000587
282730
Bacillota
TAC
Val
>WENV180452641
OBXK01000073
179263
Bacillota
TCT
Arg
>WENV180452815
OBXK01000426
284886
Bacillota
TGT
Thr
>WENV180452823
OBXK01000426
306976
Bacillota
GAA
Phe
>WENV180452911
OBXK01001576
119278
Bacillota
TAG
Leu
>WENV180452957
OBXK01012345
284105
Bacillota
GTT
Asn
>WENV180452837
OBXK01000426
73685
Bacillota
CAA
Leu
>WENV180452836
OBXK01000426
481245
Bacillota
GCA
Cys
>WENV180452634
OBXK01000066
400626
Bacillota
CCG
Arg
>WENV180452825
OBXK01000426
179264
Bacillota
GAT
Ile
>WENV180452934
OBXK01005270
179264
Bacillota
GAT
Ile
>WENV180452701
OBXK01000148
46845
Bacillota
AAG
Leu
>WENV180452810
OBXK01000406
284106
Bacillota
GGT
Thr
>WENV180452814
OBXK01000426
284112
Bacillota
TTT
Lys
>WENV180452817
OBXK01000426
178962
Bacillota
ACG
Arg
>WENV180452818
OBXK01000426
197141
Bacillota
TGG
Pro
>WENV180452744
OBXK01000239
8644
Bacillota
GGA
Ser
>WENV180452835
OBXK01000426
407007
Bacillota
TTG
Gln
>WENV180452782
OBXK01000342
408869
Bacillota
CTC
Glu
>WENV180452806
OBXK01000387
481173
Bacillota
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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