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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180457740
OBXV01000029
73057
Bacteroidota
GAG
Leu
>WENV180457977
OBXV01000215
280557
Bacteroidota
CAT
Met
>WENV180457777
OBXV01000041
398872
Bacteroidota
GGT
Thr
>WENV180457737
OBXV01000028
175936
Bacteroidota
CAT
Met
>WENV180457814
OBXV01000062
57807
Bacteroidota
TGA
Ser
>WENV180457815
OBXV01000062
57807
Bacteroidota
TGA
Ser
>WENV180457624
OBXV01000003
398860
Bacteroidota
CTC
Glu
>WENV180457834
OBXV01000075
480404
Bacteroidota
TTG
Gln
>WENV180457687
OBXV01000014
99847
Bacteroidota
GTA
Tyr
>WENV180457734
OBXV01000028
399026
Bacteroidota
CCT
Arg
>WENV180457745
OBXV01000030
20766
Bacteroidota
GGA
Ser
>WENV180457622
OBXV01000002
175844
Bacteroidota
GGC
Ala
>WENV180457744
OBXV01000029
280532
Bacteroidota
>WENV180457765
OBXV01000037
480318
Bacteroidota
CTG
Gln
>WENV180457766
OBXV01000037
158068
Bacteroidota
GGG
Pro
>WENV180457807
OBXV01000058
176192
Bacteroidota
TCT
Arg
>WENV180458093
OBXV01000588
117804
Bacteroidota
TAG
Leu
>WENV180457816
OBXV01000062
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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