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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
101 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180463925
OBYD01000037
285360
Bacteroidota
TTT
Lys
>WENV180464174
OBYD01000289
285360
Bacteroidota
TTT
Lys
>WENV180464158
OBYD01000253
117741
Bacteroidota
TAG
Leu
>WENV180463869
OBYD01000005
398829
Bacteroidota
CCT
Arg
>WENV180463934
OBYD01000039
175838
Bacteroidota
GTT
Asn
>WENV180463935
OBYD01000039
175838
Bacteroidota
GTT
Asn
>WENV180464251
OBYD01000413
404226
Bacteroidota
CCT
Arg
>WENV180464128
OBYD01000192
175904
Bacteroidota
CGG
Pro
>WENV180464866
OBYD01045949
73057
Bacteroidota
GAG
Leu
>WENV180464280
OBYD01000461
280553
Bacteroidota
TTT
Lys
>WENV180464113
OBYD01000176
280553
Bacteroidota
TTT
Lys
>WENV180463949
OBYD01000051
280557
Bacteroidota
CAT
Met
>WENV180463941
OBYD01000043
20206
Bacteroidota
GGA
Ser
>WENV180464250
OBYD01000413
398871
Bacteroidota
TTC
Glu
>WENV180464249
OBYD01000413
398871
Bacteroidota
TTC
Glu
>WENV180463936
OBYD01000040
201819
Bacteroidota
CAT
Met
>WENV180464905
OBYD01065208
56493
Bacteroidota
TGA
Ser
>WENV180463900
OBYD01000017
56493
Bacteroidota
TGA
Ser
>WENV180463892
OBYD01000013
56493
Bacteroidota
TGA
Ser
>WENV180464165
OBYD01000271
175906
Bacteroidota
GTG
His
>WENV180464164
OBYD01000271
175906
Bacteroidota
GTG
His
>WENV180464083
OBYD01000147
175903
Bacteroidota
GTG
His
>WENV180464656
OBYD01006082
351598
Bacteroidota
CGG
Pro
>WENV180464306
OBYD01000523
351598
Bacteroidota
CGG
Pro
>WENV180464022
OBYD01000100
351598
Bacteroidota
CGG
Pro
>WENV180463928
OBYD01000038
351598
Bacteroidota
CGG
Pro
>WENV180463910
OBYD01000022
351598
Bacteroidota
CGG
Pro
>WENV180464682
OBYD01008863
291612
Bacteroidota
>WENV180464006
OBYD01000092
118089
Bacteroidota
TAG
Leu
>WENV180464894
OBYD01064342
398872
Bacteroidota
GGT
Thr
>WENV180464129
OBYD01000192
280530
Bacteroidota
CCA
Trp
>WENV180464142
OBYD01000221
175936
Bacteroidota
CAT
Met
>WENV180464162
OBYD01000265
203954
Bacteroidota
GTC
Asp
>WENV180464161
OBYD01000265
203954
Bacteroidota
GTC
Asp
>WENV180464203
OBYD01000338
178907
Bacteroidota
TCT
Arg
>WENV180464144
OBYD01000222
20449
Bacteroidota
GGA
Ser
>WENV180464079
OBYD01000145
20449
Bacteroidota
GGA
Ser
>WENV180463932
OBYD01000039
56072
Bacteroidota
TAA
Leu
>WENV180464290
OBYD01000484
57807
Bacteroidota
TGA
Ser
>WENV180464057
OBYD01000134
57807
Bacteroidota
TGA
Ser
>WENV180464033
OBYD01000111
57807
Bacteroidota
TGA
Ser
>WENV180463976
OBYD01000063
57807
Bacteroidota
TGA
Ser
>WENV180463975
OBYD01000063
57807
Bacteroidota
TGA
Ser
>WENV180463899
OBYD01000017
57807
Bacteroidota
TGA
Ser
>WENV180463893
OBYD01000013
57807
Bacteroidota
TGA
Ser
>WENV180463857
OBYD01000001
175902
Bacteroidota
GGC
Ala
>WENV180464112
OBYD01000174
398860
Bacteroidota
CTC
Glu
>WENV180463927
OBYD01000037
398860
Bacteroidota
CTC
Glu
>WENV180464131
OBYD01000193
480404
Bacteroidota
TTG
Gln
>WENV180463885
OBYD01000009
480404
Bacteroidota
TTG
Gln
>WENV180463912
OBYD01000025
280451
Bacteroidota
CGT
Thr
>WENV180464871
OBYD01048395
99847
Bacteroidota
GTA
Tyr
>WENV180464861
OBYD01042448
99847
Bacteroidota
GTA
Tyr
>WENV180464215
OBYD01000356
99847
Bacteroidota
GTA
Tyr
>WENV180464135
OBYD01000213
99847
Bacteroidota
GTA
Tyr
>WENV180463904
OBYD01000019
99847
Bacteroidota
GTA
Tyr
>WENV180463967
OBYD01000059
399200
Bacteroidota
CAT
Met
>WENV180464147
OBYD01000226
332896
Bacteroidota
TTT
Lys
>WENV180463951
OBYD01000052
332896
Bacteroidota
TTT
Lys
>WENV180463919
OBYD01000030
332896
Bacteroidota
TTT
Lys
>WENV180463907
OBYD01000022
332896
Bacteroidota
TTT
Lys
>WENV180463940
OBYD01000043
488746
Bacteroidota
CTG
Gln
>WENV180464031
OBYD01000108
399026
Bacteroidota
CCT
Arg
>WENV180464155
OBYD01000248
280478
Bacteroidota
GCC
Gly
>WENV180464153
OBYD01000248
280478
Bacteroidota
GCC
Gly
>WENV180463983
OBYD01000072
280478
Bacteroidota
GCC
Gly
>WENV180463901
OBYD01000017
20766
Bacteroidota
GGA
Ser
>WENV180464110
OBYD01000173
20766
Bacteroidota
GGA
Ser
>WENV180464468
OBYD01001234
20766
Bacteroidota
GGA
Ser
>WENV180464864
OBYD01044340
186108
Bacteroidota
GTT
Asn
>WENV180464118
OBYD01000181
175844
Bacteroidota
GGC
Ala
>WENV180464125
OBYD01000185
280532
Bacteroidota
>WENV180463875
OBYD01000006
229246
Bacteroidota
GGC
Ala
>WENV180464005
OBYD01000092
73011
Bacteroidota
CAA
Leu
>WENV180463996
OBYD01000081
480318
Bacteroidota
CTG
Gln
>WENV180463995
OBYD01000081
158068
Bacteroidota
GGG
Pro
>WENV180463939
OBYD01000043
158068
Bacteroidota
GGG
Pro
>WENV180463897
OBYD01000016
158068
Bacteroidota
GGG
Pro
>WENV180463946
OBYD01000047
398828
Bacteroidota
CCG
Arg
>WENV180464081
OBYD01000145
74084
Bacteroidota
CAG
Leu
>WENV180463984
OBYD01000072
74084
Bacteroidota
CAG
Leu
>WENV180464117
OBYD01000180
159415
Bacteroidota
TAC
Val
>WENV180464116
OBYD01000180
159415
Bacteroidota
TAC
Val
>WENV180463972
OBYD01000061
480325
Bacteroidota
CTG
Gln
>WENV180463971
OBYD01000061
480325
Bacteroidota
CTG
Gln
>WENV180464618
OBYD01004160
176192
Bacteroidota
TCT
Arg
>WENV180464052
OBYD01000128
176192
Bacteroidota
TCT
Arg
>WENV180463920
OBYD01000031
176192
Bacteroidota
TCT
Arg
>WENV180463911
OBYD01000023
280446
Bacteroidota
TTT
Lys
>WENV180463867
OBYD01000004
280446
Bacteroidota
TTT
Lys
>WENV180463848
OBYD01000001
280446
Bacteroidota
TTT
Lys
>WENV180464115
OBYD01000179
484496
Bacteroidota
TTG
Gln
>WENV180463864
OBYD01000002
484496
Bacteroidota
TTG
Gln
>WENV180464356
OBYD01000637
285750
Bacteroidota
CCC
Gly
>WENV180464261
OBYD01000427
117804
Bacteroidota
TAG
Leu
>WENV180464318
OBYD01000538
398836
Bacteroidota
GCA
Cys
>WENV180463992
OBYD01000078
398836
Bacteroidota
GCA
Cys
>WENV180463977
OBYD01000063
398836
Bacteroidota
GCA
Cys
>WENV180463973
OBYD01000061
398836
Bacteroidota
GCA
Cys
>WENV180463861
OBYD01000001
398836
Bacteroidota
GCA
Cys
>WENV180463922
OBYD01000033
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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