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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180467712
OBYI01017628
175883
Actinomycetota
GAT
Ile
>WENV180467549
OBYI01000602
175907
Actinomycetota
TAC
Val
>WENV180467537
OBYI01000566
280498
Actinomycetota
GTT
Asn
>WENV180467538
OBYI01000566
280498
Actinomycetota
GTT
Asn
>WENV180467443
OBYI01000322
295964
Actinomycetota
GTT
Asn
>WENV180467600
OBYI01000998
56083
Actinomycetota
CGA
Ser
>WENV180467556
OBYI01000688
140768
Actinomycetota
TAG
Leu
>WENV180467579
OBYI01000763
176075
Actinomycetota
TCT
Arg
>WENV180467707
OBYI01016147
176078
Actinomycetota
GGG
Pro
>WENV180467510
OBYI01000461
482604
Actinomycetota
TTG
Gln
>WENV180467584
OBYI01000816
59689
Actinomycetota
GGA
Ser
>WENV180467456
OBYI01000368
175837
Actinomycetota
ACG
Arg
>WENV180467455
OBYI01000368
175837
Actinomycetota
ACG
Arg
>WENV180467515
OBYI01000468
29393
Actinomycetota
GCT
Ser
>WENV180467382
OBYI01000184
280549
Actinomycetota
CAC
Val
>WENV180467599
OBYI01000966
280549
Actinomycetota
CAC
Val
>WENV180467601
OBYI01001008
349164
Actinomycetota
CTC
Glu
>WENV180467485
OBYI01000437
398947
Actinomycetota
CCA
Trp
>WENV180467481
OBYI01000434
280702
Actinomycetota
GGC
Ala
>WENV180467480
OBYI01000434
280702
Actinomycetota
GGC
Ala
>WENV180467667
OBYI01006868
398843
Actinomycetota
GTT
Asn
>WENV180467381
OBYI01000184
434162
Actinomycetota
GAC
Val
>WENV180467598
OBYI01000966
434162
Actinomycetota
GAC
Val
>WENV180467521
OBYI01000487
176077
Actinomycetota
CAT
Met
>WENV180467416
OBYI01000249
21508
Actinomycetota
GAG
Leu
>WENV180467723
OBYI01020314
241064
Actinomycetota
CTC
Glu
>WENV180467542
OBYI01000571
280524
Actinomycetota
TGC
Ala
>WENV180467523
OBYI01000495
398948
Actinomycetota
TTC
Glu
>WENV180467612
OBYI01001139
150272
Actinomycetota
TAA
Leu
>WENV180467463
OBYI01000376
117777
Actinomycetota
>WENV180467464
OBYI01000376
175949
Actinomycetota
CAT
Met
>WENV180467622
OBYI01001556
191955
Actinomycetota
TGT
Thr
>WENV180467558
OBYI01000697
280544
Actinomycetota
GTG
His
>WENV180467691
OBYI01012336
280536
Actinomycetota
CTT
Lys
>WENV180467557
OBYI01000688
280496
Actinomycetota
CGT
Thr
>WENV180467586
OBYI01000832
280703
Actinomycetota
CCT
Arg
>WENV180467482
OBYI01000434
184157
Actinomycetota
TGG
Pro
>WENV180467433
OBYI01000293
280450
Actinomycetota
TTT
Lys
>WENV180467555
OBYI01000688
323758
Actinomycetota
CGT
Thr
>WENV180467493
OBYI01000442
358727
Actinomycetota
CCG
Arg
>WENV180467499
OBYI01000454
99865
Actinomycetota
CAG
Leu
>WENV180467434
OBYI01000293
222475
Actinomycetota
CTT
Lys
>WENV180467585
OBYI01000831
175843
Actinomycetota
CAA
Leu
>WENV180467484
OBYI01000437
3983
Actinomycetota
GCT
Ser
>WENV180467614
OBYI01001242
56075
Actinomycetota
TGA
Ser
>WENV180467602
OBYI01001008
430848
Actinomycetota
CTG
Gln
>WENV180467541
OBYI01000571
179238
Actinomycetota
GAT
Ile
>WENV180467664
OBYI01006118
60767
Actinomycetota
TGA
Ser
>WENV180467452
OBYI01000344
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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