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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
98 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180473464
OBYR01000256
285360
Bacteroidota
TTT
Lys
>WENV180473616
OBYR01000634
285360
Bacteroidota
TTT
Lys
>WENV180473421
OBYR01000177
117741
Bacteroidota
TAG
Leu
>WENV180473202
OBYR01000003
398829
Bacteroidota
CCT
Arg
>WENV180473200
OBYR01000003
175838
Bacteroidota
GTT
Asn
>WENV180473201
OBYR01000003
175838
Bacteroidota
GTT
Asn
>WENV180473197
OBYR01000002
404226
Bacteroidota
CCT
Arg
>WENV180473404
OBYR01000158
404226
Bacteroidota
CCT
Arg
>WENV180473587
OBYR01000543
175904
Bacteroidota
CGG
Pro
>WENV180473356
OBYR01000113
175904
Bacteroidota
CGG
Pro
>WENV180473678
OBYR01000995
280553
Bacteroidota
TTT
Lys
>WENV180473436
OBYR01000201
280553
Bacteroidota
TTT
Lys
>WENV180473557
OBYR01000438
280557
Bacteroidota
CAT
Met
>WENV180473692
OBYR01001133
20492
Bacteroidota
GGA
Ser
>WENV180473705
OBYR01001280
20492
Bacteroidota
GGA
Ser
>WENV180473249
OBYR01000022
20206
Bacteroidota
GGA
Ser
>WENV180473403
OBYR01000158
398871
Bacteroidota
TTC
Glu
>WENV180473402
OBYR01000158
398871
Bacteroidota
TTC
Glu
>WENV180473195
OBYR01000002
398871
Bacteroidota
TTC
Glu
>WENV180473194
OBYR01000002
398871
Bacteroidota
TTC
Glu
>WENV180473740
OBYR01002241
56493
Bacteroidota
TGA
Ser
>WENV180473518
OBYR01000344
56493
Bacteroidota
TGA
Ser
>WENV180473652
OBYR01000810
175906
Bacteroidota
GTG
His
>WENV180473651
OBYR01000810
175906
Bacteroidota
GTG
His
>WENV180473407
OBYR01000165
175903
Bacteroidota
GTG
His
>WENV180473511
OBYR01000316
291612
Bacteroidota
>WENV180473304
OBYR01000056
291612
Bacteroidota
>WENV180473597
OBYR01000565
118089
Bacteroidota
TAG
Leu
>WENV180473186
OBYR01000001
118089
Bacteroidota
TAG
Leu
>WENV180473579
OBYR01000527
398872
Bacteroidota
GGT
Thr
>WENV180473491
OBYR01000284
175908
Bacteroidota
GTC
Asp
>WENV180473490
OBYR01000284
175908
Bacteroidota
GTC
Asp
>WENV180473204
OBYR01000004
175908
Bacteroidota
GTC
Asp
>WENV180473588
OBYR01000543
280530
Bacteroidota
CCA
Trp
>WENV180473494
OBYR01000291
280530
Bacteroidota
CCA
Trp
>WENV180473389
OBYR01000149
280530
Bacteroidota
CCA
Trp
>WENV180473323
OBYR01000069
178907
Bacteroidota
TCT
Arg
>WENV180473208
OBYR01000004
178907
Bacteroidota
TCT
Arg
>WENV180473488
OBYR01000283
29791
Bacteroidota
GCT
Ser
>WENV180473680
OBYR01001029
29791
Bacteroidota
GCT
Ser
>WENV180473609
OBYR01000599
20449
Bacteroidota
GGA
Ser
>WENV180473244
OBYR01000021
20449
Bacteroidota
GGA
Ser
>WENV180473199
OBYR01000003
56072
Bacteroidota
TAA
Leu
>WENV180473819
OBYR01007577
57807
Bacteroidota
TGA
Ser
>WENV180473757
OBYR01002796
57807
Bacteroidota
TGA
Ser
>WENV180473704
OBYR01001276
57807
Bacteroidota
TGA
Ser
>WENV180473406
OBYR01000164
57807
Bacteroidota
TGA
Ser
>WENV180473343
OBYR01000091
57807
Bacteroidota
TGA
Ser
>WENV180473314
OBYR01000065
57807
Bacteroidota
TGA
Ser
>WENV180473213
OBYR01000006
57807
Bacteroidota
TGA
Ser
>WENV180473350
OBYR01000095
175902
Bacteroidota
GGC
Ala
>WENV180473794
OBYR01005295
398860
Bacteroidota
CTC
Glu
>WENV180473681
OBYR01001029
398860
Bacteroidota
CTC
Glu
>WENV180473612
OBYR01000616
398860
Bacteroidota
CTC
Glu
>WENV180473489
OBYR01000283
398860
Bacteroidota
CTC
Glu
>WENV180473243
OBYR01000019
280451
Bacteroidota
CGT
Thr
>WENV180473929
OBYR01037328
99847
Bacteroidota
GTA
Tyr
>WENV180473796
OBYR01005461
99847
Bacteroidota
GTA
Tyr
>WENV180473660
OBYR01000856
99847
Bacteroidota
GTA
Tyr
>WENV180473215
OBYR01000006
99847
Bacteroidota
GTA
Tyr
>WENV180473458
OBYR01000238
399200
Bacteroidota
CAT
Met
>WENV180473457
OBYR01000238
399200
Bacteroidota
CAT
Met
>WENV180473549
OBYR01000414
180199
Bacteroidota
CAT
Met
>WENV180473669
OBYR01000918
280478
Bacteroidota
GCC
Gly
>WENV180473372
OBYR01000125
186108
Bacteroidota
GTT
Asn
>WENV180473371
OBYR01000125
186108
Bacteroidota
GTT
Asn
>WENV180473619
OBYR01000674
175844
Bacteroidota
GGC
Ala
>WENV180473363
OBYR01000120
175844
Bacteroidota
GGC
Ala
>WENV180473443
OBYR01000220
73011
Bacteroidota
CAA
Leu
>WENV180473337
OBYR01000079
73011
Bacteroidota
CAA
Leu
>WENV180473742
OBYR01002290
480318
Bacteroidota
CTG
Gln
>WENV180473250
OBYR01000023
158068
Bacteroidota
GGG
Pro
>WENV180473247
OBYR01000022
158068
Bacteroidota
GGG
Pro
>WENV180473766
OBYR01003403
186142
Bacteroidota
GAT
Ile
>WENV180473320
OBYR01000067
398828
Bacteroidota
CCG
Arg
>WENV180473709
OBYR01001395
74084
Bacteroidota
CAG
Leu
>WENV180473682
OBYR01001041
74084
Bacteroidota
CAG
Leu
>WENV180473667
OBYR01000906
159415
Bacteroidota
TAC
Val
>WENV180473666
OBYR01000906
159415
Bacteroidota
TAC
Val
>WENV180473385
OBYR01000145
480325
Bacteroidota
CTG
Gln
>WENV180473384
OBYR01000145
480325
Bacteroidota
CTG
Gln
>WENV180473852
OBYR01011183
176192
Bacteroidota
TCT
Arg
>WENV180473558
OBYR01000451
176192
Bacteroidota
TCT
Arg
>WENV180473341
OBYR01000088
176192
Bacteroidota
TCT
Arg
>WENV180473690
OBYR01001092
400088
Bacteroidota
GGT
Thr
>WENV180473648
OBYR01000786
280446
Bacteroidota
TTT
Lys
>WENV180473222
OBYR01000008
280446
Bacteroidota
TTT
Lys
>WENV180473554
OBYR01000427
484496
Bacteroidota
TTG
Gln
>WENV180473336
OBYR01000078
484496
Bacteroidota
TTG
Gln
>WENV180473225
OBYR01000011
484496
Bacteroidota
TTG
Gln
>WENV180473638
OBYR01000736
285750
Bacteroidota
CCC
Gly
>WENV180473767
OBYR01003403
186143
Bacteroidota
TGC
Ala
>WENV180473670
OBYR01000927
398836
Bacteroidota
GCA
Cys
>WENV180473572
OBYR01000491
398836
Bacteroidota
GCA
Cys
>WENV180473501
OBYR01000304
398836
Bacteroidota
GCA
Cys
>WENV180473484
OBYR01000279
398836
Bacteroidota
GCA
Cys
>WENV180473418
OBYR01000173
398836
Bacteroidota
GCA
Cys
>WENV180473219
OBYR01000008
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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