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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180474251
OBYS01000308
295385
Bacteroidota
CCA
Trp
>WENV180474569
OBYS01002939
295385
Bacteroidota
CCA
Trp
>WENV180474174
OBYS01000167
117741
Bacteroidota
TAG
Leu
>WENV180473940
OBYS01000001
398829
Bacteroidota
CCT
Arg
>WENV180473991
OBYS01000017
398829
Bacteroidota
CCT
Arg
>WENV180474797
OBYS01052283
175838
Bacteroidota
GTT
Asn
>WENV180474215
OBYS01000236
404226
Bacteroidota
CCT
Arg
>WENV180474610
OBYS01004793
175904
Bacteroidota
CGG
Pro
>WENV180474285
OBYS01000380
280557
Bacteroidota
CAT
Met
>WENV180473942
OBYS01000002
20206
Bacteroidota
GGA
Ser
>WENV180474615
OBYS01005400
398871
Bacteroidota
TTC
Glu
>WENV180474126
OBYS01000116
201819
Bacteroidota
CAT
Met
>WENV180474669
OBYS01011093
175906
Bacteroidota
GTG
His
>WENV180474043
OBYS01000050
175903
Bacteroidota
GTG
His
>WENV180474571
OBYS01003053
351598
Bacteroidota
CGG
Pro
>WENV180474447
OBYS01000985
351598
Bacteroidota
CGG
Pro
>WENV180474093
OBYS01000086
351598
Bacteroidota
CGG
Pro
>WENV180474042
OBYS01000049
351598
Bacteroidota
CGG
Pro
>WENV180474704
OBYS01016968
118089
Bacteroidota
TAG
Leu
>WENV180474250
OBYS01000308
398872
Bacteroidota
GGT
Thr
>WENV180474435
OBYS01000944
398872
Bacteroidota
GGT
Thr
>WENV180474611
OBYS01004793
280530
Bacteroidota
CCA
Trp
>WENV180474549
OBYS01002242
178907
Bacteroidota
TCT
Arg
>WENV180474068
OBYS01000066
29791
Bacteroidota
GCT
Ser
>WENV180474763
OBYS01030479
20449
Bacteroidota
GGA
Ser
>WENV180473939
OBYS01000001
56072
Bacteroidota
TAA
Leu
>WENV180474485
OBYS01001168
57807
Bacteroidota
TGA
Ser
>WENV180474216
OBYS01000237
57807
Bacteroidota
TGA
Ser
>WENV180474118
OBYS01000106
57807
Bacteroidota
TGA
Ser
>WENV180473966
OBYS01000009
57807
Bacteroidota
TGA
Ser
>WENV180474025
OBYS01000039
175902
Bacteroidota
GGC
Ala
>WENV180474069
OBYS01000066
398860
Bacteroidota
CTC
Glu
>WENV180474056
OBYS01000056
280451
Bacteroidota
CGT
Thr
>WENV180474270
OBYS01000328
99847
Bacteroidota
GTA
Tyr
>WENV180474249
OBYS01000308
99847
Bacteroidota
GTA
Tyr
>WENV180473968
OBYS01000009
99847
Bacteroidota
GTA
Tyr
>WENV180474757
OBYS01028074
399200
Bacteroidota
CAT
Met
>WENV180474347
OBYS01000561
332896
Bacteroidota
TTT
Lys
>WENV180474067
OBYS01000066
332896
Bacteroidota
TTT
Lys
>WENV180473941
OBYS01000002
488746
Bacteroidota
CTG
Gln
>WENV180474629
OBYS01005921
280478
Bacteroidota
GCC
Gly
>WENV180474531
OBYS01001732
175844
Bacteroidota
GGC
Ala
>WENV180473984
OBYS01000014
158068
Bacteroidota
GGG
Pro
>WENV180473943
OBYS01000002
158068
Bacteroidota
GGG
Pro
>WENV180474090
OBYS01000085
398828
Bacteroidota
CCG
Arg
>WENV180474665
OBYS01010035
74084
Bacteroidota
CAG
Leu
>WENV180474576
OBYS01003224
480325
Bacteroidota
CTG
Gln
>WENV180474575
OBYS01003224
480325
Bacteroidota
CTG
Gln
>WENV180474322
OBYS01000493
176192
Bacteroidota
TCT
Arg
>WENV180474653
OBYS01008751
400088
Bacteroidota
GGT
Thr
>WENV180474017
OBYS01000029
280446
Bacteroidota
TTT
Lys
>WENV180473961
OBYS01000007
280446
Bacteroidota
TTT
Lys
>WENV180473944
OBYS01000002
280446
Bacteroidota
TTT
Lys
>WENV180474217
OBYS01000240
484496
Bacteroidota
TTG
Gln
>WENV180473987
OBYS01000015
484496
Bacteroidota
TTG
Gln
>WENV180474685
OBYS01013236
285750
Bacteroidota
CCC
Gly
>WENV180474113
OBYS01000102
398836
Bacteroidota
GCA
Cys
>WENV180473963
OBYS01000007
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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