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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180478099
OBZA01000169
481233
Actinomycetota
CCC
Gly
>WENV180477959
OBZA01000001
147829
Actinomycetota
TAA
Leu
>WENV180478043
OBZA01000024
280498
Actinomycetota
GTT
Asn
>WENV180478051
OBZA01000029
295964
Actinomycetota
GTT
Asn
>WENV180477984
OBZA01000003
140768
Actinomycetota
TAG
Leu
>WENV180477957
OBZA01000001
176075
Actinomycetota
TCT
Arg
>WENV180477955
OBZA01000001
175848
Actinomycetota
TGG
Pro
>WENV180478049
OBZA01000024
176078
Actinomycetota
GGG
Pro
>WENV180477986
OBZA01000003
59689
Actinomycetota
GGA
Ser
>WENV180477964
OBZA01000001
175837
Actinomycetota
ACG
Arg
>WENV180477963
OBZA01000001
175837
Actinomycetota
ACG
Arg
>WENV180478003
OBZA01000005
29393
Actinomycetota
GCT
Ser
>WENV180478047
OBZA01000024
280549
Actinomycetota
CAC
Val
>WENV180478000
OBZA01000005
280549
Actinomycetota
CAC
Val
>WENV180478071
OBZA01000084
349164
Actinomycetota
CTC
Glu
>WENV180477953
OBZA01000001
20450
Actinomycetota
GAG
Leu
>WENV180477961
OBZA01000001
280702
Actinomycetota
GGC
Ala
>WENV180477962
OBZA01000001
280702
Actinomycetota
GGC
Ala
>WENV180478073
OBZA01000097
176077
Actinomycetota
CAT
Met
>WENV180478021
OBZA01000012
280524
Actinomycetota
TGC
Ala
>WENV180477996
OBZA01000005
398948
Actinomycetota
TTC
Glu
>WENV180478001
OBZA01000005
117777
Actinomycetota
>WENV180478002
OBZA01000005
175949
Actinomycetota
CAT
Met
>WENV180477958
OBZA01000001
227544
Actinomycetota
TAC
Val
>WENV180478022
OBZA01000012
191955
Actinomycetota
TGT
Thr
>WENV180477956
OBZA01000001
280544
Actinomycetota
GTG
His
>WENV180478090
OBZA01000124
280703
Actinomycetota
CCT
Arg
>WENV180477979
OBZA01000003
280450
Actinomycetota
TTT
Lys
>WENV180478046
OBZA01000024
468141
Actinomycetota
GAC
Val
>WENV180477999
OBZA01000005
468141
Actinomycetota
GAC
Val
>WENV180477983
OBZA01000003
323758
Actinomycetota
CGT
Thr
>WENV180477981
OBZA01000003
358727
Actinomycetota
CCG
Arg
>WENV180478004
OBZA01000005
56451
Actinomycetota
CGA
Ser
>WENV180478098
OBZA01000169
99865
Actinomycetota
CAG
Leu
>WENV180477980
OBZA01000003
222475
Actinomycetota
CTT
Lys
>WENV180477960
OBZA01000001
175843
Actinomycetota
CAA
Leu
>WENV180478072
OBZA01000084
430848
Actinomycetota
CTG
Gln
>WENV180478020
OBZA01000012
179238
Actinomycetota
GAT
Ile
>WENV180478005
OBZA01000005
60767
Actinomycetota
TGA
Ser
>WENV180477954
OBZA01000001
506175
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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