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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180488060
OBZQ01001019
179231
Actinomycetota
TAC
Val
>WENV180487842
OBZQ01000207
176499
Actinomycetota
CAT
Met
>WENV180487871
OBZQ01000256
147806
Actinomycetota
TAA
Leu
>WENV180487915
OBZQ01000333
280498
Actinomycetota
GTT
Asn
>WENV180487916
OBZQ01000333
280498
Actinomycetota
GTT
Asn
>WENV180487956
OBZQ01000402
280498
Actinomycetota
GTT
Asn
>WENV180488183
OBZQ01002867
295964
Actinomycetota
GTT
Asn
>WENV180488227
OBZQ01004297
459899
Actinomycetota
TTC
Glu
>WENV180488111
OBZQ01001314
56083
Actinomycetota
CGA
Ser
>WENV180487884
OBZQ01000279
140768
Actinomycetota
TAG
Leu
>WENV180488149
OBZQ01002016
176075
Actinomycetota
TCT
Arg
>WENV180488209
OBZQ01003649
175848
Actinomycetota
TGG
Pro
>WENV180487962
OBZQ01000425
59689
Actinomycetota
GGA
Ser
>WENV180487760
OBZQ01000105
175837
Actinomycetota
ACG
Arg
>WENV180487759
OBZQ01000105
175837
Actinomycetota
ACG
Arg
>WENV180488226
OBZQ01004295
29393
Actinomycetota
GCT
Ser
>WENV180488337
OBZQ01014264
280549
Actinomycetota
CAC
Val
>WENV180488299
OBZQ01008027
280702
Actinomycetota
GGC
Ala
>WENV180488139
OBZQ01001687
176077
Actinomycetota
CAT
Met
>WENV180488329
OBZQ01012343
21508
Actinomycetota
GAG
Leu
>WENV180488145
OBZQ01001801
280524
Actinomycetota
TGC
Ala
>WENV180488416
OBZQ01030038
150272
Actinomycetota
TAA
Leu
>WENV180488219
OBZQ01004067
280523
Actinomycetota
GGC
Ala
>WENV180487955
OBZQ01000402
280523
Actinomycetota
GGC
Ala
>WENV180488000
OBZQ01000604
176555
Actinomycetota
CAT
Met
>WENV180488270
OBZQ01005918
191955
Actinomycetota
TGT
Thr
>WENV180488274
OBZQ01006004
280544
Actinomycetota
GTG
His
>WENV180488161
OBZQ01002363
280496
Actinomycetota
CGT
Thr
>WENV180488122
OBZQ01001478
280703
Actinomycetota
CCT
Arg
>WENV180487668
OBZQ01000029
280450
Actinomycetota
TTT
Lys
>WENV180487986
OBZQ01000554
56166
Actinomycetota
TGA
Ser
>WENV180487830
OBZQ01000178
358727
Actinomycetota
CCG
Arg
>WENV180488026
OBZQ01000713
480329
Actinomycetota
CCC
Gly
>WENV180487912
OBZQ01000326
175882
Actinomycetota
TGG
Pro
>WENV180487966
OBZQ01000449
480319
Actinomycetota
TTG
Gln
>WENV180487719
OBZQ01000075
280499
Actinomycetota
CCT
Arg
>WENV180487896
OBZQ01000308
398853
Actinomycetota
CTG
Gln
>WENV180487911
OBZQ01000326
176642
Actinomycetota
CAA
Leu
>WENV180488232
OBZQ01004455
175843
Actinomycetota
CAA
Leu
>WENV180487740
OBZQ01000091
203883
Actinomycetota
TCT
Arg
>WENV180488338
OBZQ01014359
56075
Actinomycetota
TGA
Ser
>WENV180488042
OBZQ01000828
46642
Actinomycetota
CGA
Ser
>WENV180488093
OBZQ01001198
104211
Actinomycetota
CAG
Leu
>WENV180487841
OBZQ01000207
117903
Actinomycetota
GTA
Tyr
>WENV180487883
OBZQ01000279
280470
Actinomycetota
CGT
Thr
>WENV180488173
OBZQ01002680
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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