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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180488908
OBZR01002404
176044
Gammaproteobacteria
GAC
Val
>WENV180489167
OBZR01025286
176044
Gammaproteobacteria
GAC
Val
>WENV180488920
OBZR01002632
400836
Gammaproteobacteria
TTG
Gln
>WENV180489025
OBZR01006203
123068
Gammaproteobacteria
CAA
Leu
>WENV180489187
OBZR01030951
280674
Gammaproteobacteria
TAC
Val
>WENV180489010
OBZR01005177
355224
Gammaproteobacteria
GGT
Thr
>WENV180488532
OBZR01000029
466919
Gammaproteobacteria
CCT
Arg
>WENV180488947
OBZR01003140
280668
Gammaproteobacteria
GTT
Asn
>WENV180488977
OBZR01003956
176041
Gammaproteobacteria
CGG
Pro
>WENV180489029
OBZR01006376
99863
Gammaproteobacteria
CAG
Leu
>WENV180489126
OBZR01017466
99863
Gammaproteobacteria
CAG
Leu
>WENV180488591
OBZR01000081
96714
Gammaproteobacteria
CAG
Leu
>WENV180488590
OBZR01000081
96714
Gammaproteobacteria
CAG
Leu
>WENV180488864
OBZR01001406
496392
Gammaproteobacteria
CCC
Gly
>WENV180488932
OBZR01002885
8505
Gammaproteobacteria
GCT
Ser
>WENV180488907
OBZR01002404
176043
Gammaproteobacteria
GAC
Val
>WENV180489168
OBZR01025286
176043
Gammaproteobacteria
GAC
Val
>WENV180488832
OBZR01001067
176040
Gammaproteobacteria
GGG
Pro
>WENV180488919
OBZR01002632
176035
Gammaproteobacteria
CAT
Met
>WENV180489074
OBZR01011743
176035
Gammaproteobacteria
CAT
Met
>WENV180488933
OBZR01002885
176039
Gammaproteobacteria
>WENV180488934
OBZR01002885
176039
Gammaproteobacteria
>WENV180489075
OBZR01011743
140781
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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